Pairwise Alignments

Query, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

Subject, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

 Score =  427 bits (1098), Expect = e-124
 Identities = 210/331 (63%), Positives = 262/331 (79%), Gaps = 2/331 (0%)

Query: 7   EDERLI--SGRRREGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHG 64
           E +RLI  SGR RE   D A+RP SL +++GQ   RE + +F+QAAR RGE++DH L  G
Sbjct: 3   EADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLIFG 62

Query: 65  PPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAI 124
           PPGLGKTTLA I+A E+GV  + TSGP++ + GDLAA+LTNLEP DVLFIDEIHRL+P +
Sbjct: 63  PPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVV 122

Query: 125 EEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLD 184
           EEVLYPAMEDFQLD++IGEGPAARS+++DLPPFTLVGATTR+G+LT PLRDRFGI  RL+
Sbjct: 123 EEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLE 182

Query: 185 FYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPV 244
           FY   +L  IV+R + +LG+A+ D+GA E+ARR+RGTPR+A RLLRRVRD+A V G+  +
Sbjct: 183 FYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQI 242

Query: 245 DAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIE 304
              +AD ALN L+VD RG D  DRR L  M + + GGPVGVD LAAA++EER T+EDV+E
Sbjct: 243 TKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDVLE 302

Query: 305 PYLIQQGFIKRTPRGRMLTAIAWTHLGLTPP 335
           PYLIQQG+I RTPRGR++T  A+ H GL  P
Sbjct: 303 PYLIQQGYIMRTPRGRVVTRHAYLHFGLNIP 333