Pairwise Alignments

Query, 520 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 795 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  179 bits (455), Expect = 3e-49
 Identities = 113/274 (41%), Positives = 160/274 (58%), Gaps = 28/274 (10%)

Query: 273 KLADDFESHIKGFADMIGSASTQLHSTAESMSGAAEEASSQAAGVSAAA----------- 321
           KLAD FE  +    + + SA+T+L + +  M+G A E SSQA  V++AA           
Sbjct: 381 KLADTFEGSVGKVIETVTSAATELEAASGQMAGTATETSSQATTVASAAQQASTNVQTVA 440

Query: 322 ---EELSASVQELGCRLKASQTLLEQARAAAQTSTSEVIQLRDAAQQIDSVIDVIGEIAG 378
              EEL++S++E+  +++ SQ +   A   A T+T +V  L     +I  ++ +I +IA 
Sbjct: 441 SATEELASSIKEIAHQVERSQAVSHHAGDEAHTTTMQVQALSANVGKIGEIVKLINDIAS 500

Query: 379 QTNLLALNATIEAARAGEHGRGFAVVAGEVKDLSAQTAKATGSITGEIRNIQTSTDATVG 438
           QTNLLALNATIEAARAGE G+GFAVVAGEVKDL+ QTAKAT  I G+I+ +Q ST   V 
Sbjct: 501 QTNLLALNATIEAARAGEAGKGFAVVAGEVKDLANQTAKATSEIAGQIQAVQDSTRVAVH 560

Query: 439 TIDTIVTLVEEITGVFSAMQDSIAIQ--------------SEATREVARNITGVSEASSI 484
            I++I  ++ E+  + SA+  ++  Q              +E T+EV RNI  V +A+  
Sbjct: 561 AIESISKVIAEMGEISSAVAAAVEQQTAATGEIARNVEQAAEGTQEVTRNIVSVEQAAKE 620

Query: 485 TSSAACDTMGAASELSRTAEALRGQVDNFLATVR 518
           T  AA     ++ ELSR AE LR +V  FL  VR
Sbjct: 621 TGQAAEQIRESSGELSRQAEFLRHEVGQFLIQVR 654