Pairwise Alignments

Query, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 342 a.a., ABC transporter ATP-binding protein YdcT from Pseudomonas sp. S08-1

 Score =  283 bits (723), Expect = 7e-81
 Identities = 162/358 (45%), Positives = 219/358 (61%), Gaps = 26/358 (7%)

Query: 31  IEIETVVKKFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQPTSGRILID 90
           ++   V + FG+  AV  VS+D+ +GEF  +LG SG GKTT LR++AGFEQP++G I I 
Sbjct: 5   VQFTDVSRVFGEVKAVDRVSIDIRDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSIRIH 64

Query: 91  GRDMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVAEMLSLVQL 150
           G +  G+PPY R VN +FQ YALFPHM+V +N+A+GLK  G+ KAER AR  E L+LV L
Sbjct: 65  GEEAAGLPPYQRDVNTVFQDYALFPHMNVLENVAYGLKVKGVAKAERLARAEEALALVAL 124

Query: 151 ERFAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLDLVNIQEKT 210
             +  RKP QLSGGQRQRVALAR+L   PRVLLLDEPL ALD KLRE+ Q +L  +Q + 
Sbjct: 125 GGYGVRKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQL 184

Query: 211 GITFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFGSVNMFEGV 270
           GITF+ VTHDQ EA++M+DRVA+ ++G I Q+D P+++Y  P + FVAEF G+ N+ +G 
Sbjct: 185 GITFIFVTHDQGEALSMSDRVAVFNKGRIEQVDTPRNLYMNPASAFVAEFVGTSNVLKGE 244

Query: 271 LVEDEPDHVMIEAPELENPIYVGHGVSGHEGATVWAALRPEKVTLVTEKPDRPYNWA-AG 329
           L +                           G+    ++RPE V L           A  G
Sbjct: 245 LAQQ------------------------LNGSPRPVSIRPEHVRLCDGSTLGGDEVAIGG 280

Query: 330 EVKDIVYLGSTSTYIVGLDTGKRMRVTVANHERDV-EWEITWGDRVYVSWAATSAVVV 386
            + DI YLG+ + Y + LD G+   V+ AN++  V +     G RV   WA  + V +
Sbjct: 281 LLHDIQYLGAATRYELQLDNGQNFAVSQANNQWGVGDAPCQPGQRVTARWARAAMVAL 338