Pairwise Alignments

Query, 241 a.a., AmpD (negative regulator of AmpC) (NCBI) from Rhodospirillum rubrum S1H

Subject, 184 a.a., N-acetylmuramoyl-L-alanine amidase from Rhodanobacter sp000427505 FW510-R12

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 36/172 (20%)

Query: 25  PGQIIDMLVIHYTGMPSAQAALA---RLLDPQAQV-SAHWLIDEDGTAYKLVEERRRAWH 80
           P   ++++VIH T +P    A     R L       S H+ +D DG  Y+ V   R A H
Sbjct: 20  PAAAVELVVIHCTELPDLATAREYGERALHASGTGNSGHYYVDRDGAVYRYVPGTRIAHH 79

Query: 81  AGVSAWGGRPGVNARSIGIELVNPG---------HEFGYRPFPEAQMTTLIALGRGILER 131
                     G N  SIGIELVN G          +    P+P AQ+  L+AL   +   
Sbjct: 80  V--------RGHNPNSIGIELVNAGRYPDWFDSRRQTMTEPYPAAQIDALLALLAQLRAE 131

Query: 132 HPIPAAHVVGH----ADVAPT---------RKEDPGELFDWQRLA-SNGIGR 169
            P     + GH     D+ P          RK DPG  F W  +  ++G+ R
Sbjct: 132 FP-HLRRIAGHEELDTDLMPASDDPARQIRRKLDPGPRFPWDAIVPASGLER 182