Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (NCBI) from Rhodospirillum rubrum S1H

Subject, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 96/358 (26%), Positives = 146/358 (40%), Gaps = 26/358 (7%)

Query: 32  GLTADSRAVAPGWLFAALPGVKADGRAFIPAALAAGASAVLAPEGTALPPDAPAALVTAA 91
           G++ DSR + PG LF AL G + DG  ++    A GA   L     A   D+    +  A
Sbjct: 27  GVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAVGALVQRAVA---DSTLPQLLVA 83

Query: 92  NPRQAFARMAAAFAGAQPATVVAVTGTNGKTSSVSFTRQIWDRLGRTAASLGTLGAESGV 151
           + R A  ++ A    A    V A+TG++GKT+       +    G   A+ G L  + G 
Sbjct: 84  DTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVLRTRGPVHATRGNLNNDFGA 143

Query: 152 YRRAGSMTTPDPVSLHKMLAEMTEAGVDALAMEASSHGLDQYRLDGVRLSAAAFTNLTRD 211
                      P++L ++  E T A ++   + AS  G   Y +   +       N    
Sbjct: 144 -----------PLTLLELAPEHTAAVIE---LGASRVGEIAYTVALTKPHVVVINNAGTA 189

Query: 212 HLDYHHTMDAYLAAKARLFGEVLGREGVAVLNADDPAFPTLAALCRDRGQSVLDYG--RS 269
           H+      +  + AK  +  E L   G+AVLN DD AF T     R  G+ VL +    +
Sbjct: 190 HVGEFGGPEKIVEAKGEIL-EGLDASGIAVLNLDDKAFETWRV--RAAGRKVLTFAVLNA 246

Query: 270 AKTLRLAGVSAKAHG-QSLDLELFGRHHSVLLPLVGDFQAMNVLCALGLAIATGAPVDAA 328
           A     + ++  A G  S  L     +  V L L+G+    N L A   A A G  +   
Sbjct: 247 AADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLFGI 306

Query: 329 VATLASLEGVPGRLEMVARRA-SGAPVYVDYAHTPDGLVTALRALRPHCRGKLVCVFG 385
              L +++ V GR   VA+ A +G  V  D  +     + A   L     G+ V V G
Sbjct: 307 ATGLGAVQPVKGR--TVAQLATNGMRVIDDTYNANQSSICAAIDLLKSFEGRKVLVLG 362