Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (NCBI) from Rhodospirillum rubrum S1H

Subject, 480 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6- diaminopimelate ligase (EC 6.3.2.13) from Sphingobium sp. HT1-2

 Score =  413 bits (1061), Expect = e-120
 Identities = 228/471 (48%), Positives = 293/471 (62%), Gaps = 7/471 (1%)

Query: 22  LGGHPGL--AIAGLTADSRAVAPGWLFAALPGVKADGRAFIPAALAAGASAVLA-PEGTA 78
           +GG+ GL  ++ G   D+R VAPG +F A  G++ +G  FI  A+ AGA A++A PE   
Sbjct: 14  VGGNTGLDTSVTGFAIDNRKVAPGTIFGAFQGLRVNGEDFIADAVKAGAVAIVARPEAKV 73

Query: 79  LPPDAPAALVTAANPRQAFARMAAAFAGAQPATVVAVTGTNGKTSSVSFTRQIWDRLGRT 138
                 A  +  ANPR+  A++AA +    P   VAVTGTNGKTS+V   RQ+W  LG  
Sbjct: 74  ----EGAVHIADANPRRLLAQLAARYFAPFPDVTVAVTGTNGKTSTVELARQLWRMLGHK 129

Query: 139 AASLGTLGAESGVYRRAGSMTTPDPVSLHKMLAEMTEAGVDALAMEASSHGLDQYRLDGV 198
           +AS+GTLG  + V + +  +TTPD V+    ++ +   G+   A EASSHGLDQYR +G+
Sbjct: 130 SASIGTLGVTTSVDQVSTGLTTPDIVTFLANMSGLKREGITHAAFEASSHGLDQYRTEGL 189

Query: 199 RLSAAAFTNLTRDHLDYHHTMDAYLAAKARLFGEVLGREGVAVLNADDPAFPTLAALCRD 258
            ++A AFTNL+RDHLDYH  MD+Y  AK RLF EV+G  G AV+ ADD            
Sbjct: 190 PVAAGAFTNLSRDHLDYHGDMDSYFDAKMRLFDEVVGDGGAAVIWADDEWSDKAIQRATK 249

Query: 259 RGQSVLDYGRSAKTLRLAGVSAKAHGQSLDLELFGRHHSVLLPLVGDFQAMNVLCALGLA 318
           RG  VL  G   + LRLA  +    GQ+L++E  G+ + V LPL+G +QA N L A GL 
Sbjct: 250 RGLRVLSVGVQGQALRLANRTPTQLGQTLEIEADGKIYKVNLPLIGAYQAANALTAAGLV 309

Query: 319 IATGAPVDAAVATLASLEGVPGRLEMVARRASGAPVYVDYAHTPDGLVTALRALRPHCRG 378
           IATG      +  L  ++ V GRLE      +GAPVYVDYAHTPDGL  A+ ALRPH RG
Sbjct: 310 IATGGDTAKVLELLGRVQPVRGRLERAVISKAGAPVYVDYAHTPDGLRAAIEALRPHTRG 369

Query: 379 KLVCVFGCGGDRDRAKRPLMGRAVAEGADVAILTDDNPRSEDPAAIRAEARVGCPDAIEI 438
           KL+ +FG GGDRD  KRPLMG+  A+ AD  I+TDDNPRSE+P+AIRA    G P A EI
Sbjct: 370 KLIALFGAGGDRDAGKRPLMGKVAADLADHVIVTDDNPRSEEPSAIRAAVMAGAPGAEEI 429

Query: 439 DGRDAAIRAGVALLGPNDLLVIAGKGHETGQTIGTVVHPFVDADHARAAVG 489
            GR AAI A +   G +D++++AGKGHE GQ IG  V PF D   AR   G
Sbjct: 430 GGRRAAIAAAIGQAGGDDIVLLAGKGHEQGQIIGDRVLPFDDVTVARECAG 480