Pairwise Alignments

Query, 443 a.a., Histidine kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 576 a.a., Signal Transduction Histidine Kinase (STHK), LytS (NCBI) from Rhodospirillum rubrum S1H

 Score =  103 bits (257), Expect = 1e-26
 Identities = 109/407 (26%), Positives = 179/407 (43%), Gaps = 48/407 (11%)

Query: 1   MNALRLEDLISVEMLQKVQDNFSAAVGIAM---IIVDERGTPVTRPSNFSAFCQTIRTSA 57
           +NA+ L + I++ ML       + +VG AM   I++D R    T+ S FSA    I   A
Sbjct: 168 VNAVHLVETIALPML------VANSVGAAMFMTILLDRRTMFETQSSVFSAKALKIAARA 221

Query: 58  A-------RRDQCFQCD----DDGGRRAMAMGEPSIYQCHCGLVDF---AAPIIVRDQYL 103
                    R+   +      ++ G  A+A+ +        G+ D        +   Q L
Sbjct: 222 EGALRSGFNRENSMRVARIIYEETGVGAVAITDRDKILAFIGIGDDHHKPGMAVTSLQTL 281

Query: 104 GAVISGQVRLRQGHEVTLEYIAPPDESWRQDAHLIALREKITEIPYVKLRSAAYTLYHLA 163
            ++   +V    G+EV  +    P         +  + E    I  +KL      L+   
Sbjct: 282 ESIRENRVMYADGNEVAYQCSISPTCPLGAALVIPLVDEGEQVIGTIKLYEPKTRLFST- 340

Query: 164 AYLVEESYSNAVSQELSAKNLKLMEESKRRVELEKSLREAELQALSYQVNPHFLFNVLNT 223
              +  +    V++ LS + L    E +R++     L ++E++ L  QVNPHFLFN LNT
Sbjct: 341 ---INRTLGEGVARLLSTQILAGRYEQQRQL-----LAQSEIKLLHAQVNPHFLFNALNT 392

Query: 224 IGRLALKEHAPKTEDMLYAFADMMRYVLKKSRSQIVSLQTEVGHVRNYLHIQKVRMGDRF 283
           +  + ++        ++ + +   R  LK++  Q V+L  EV  V  YL I+  R GDR 
Sbjct: 393 LSAV-IRLDPDHARHLVQSLSTFFRKNLKRTSEQ-VTLNDEVEQVSAYLEIELARFGDRL 450

Query: 284 TFTMDVPAKYDGILCPFMVLHPIVENSINYAIEPHEADGRIEITARDDGLNMILRVVDNG 343
           +   +VPA       P   L P+VEN+I +       DGRI ++A   G ++++RV DN 
Sbjct: 451 SVDFNVPADLGTATLPTFSLQPLVENAIKHGTAQLLGDGRIGVSAERQGGDLVVRVEDNA 510

Query: 344 DGVSPELVRAALDGVAEPH-GRTSIGLHNVDSRLRHFFGPDYGLTVE 389
                        G+ E   G   +G++ VD R+R  +G  YGL+VE
Sbjct: 511 -------------GLYERRPGGDGLGMNLVDRRIRARYGQGYGLSVE 544