Pairwise Alignments

Query, 592 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

Subject, 565 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  283 bits (724), Expect = 1e-80
 Identities = 195/555 (35%), Positives = 288/555 (51%), Gaps = 21/555 (3%)

Query: 25  RLAETLVSLVPYGVLMIIIAAALGAPSGMPGLFASPLEGQG-PLWLTGVLVAAYGGRWAL 83
           R+ E + ++ P+ +  + +A A+   SG     + PL G      L G ++ +Y G+ A 
Sbjct: 22  RVLERIFAITPFFLGSLWLADAV---SGREPALSLPLLGMCLAALLAGQMLCSYLGQMAC 78

Query: 84  VRLATDLGQRAGYTMTARLRLAVAEHLMTLPGAFFQGKDSGRLTHVFMSDVTQIEQFPGL 143
              A DL    GY      R  V +H+  LP    Q +  G L  +   DV ++E+    
Sbjct: 79  FLGAYDL--MIGY------REQVIDHIGRLPLGVLQKRRIGHLAAIVTDDVKRVEEIFTH 130

Query: 144 ILPRLVSLVGLSLAAVVAALWADWRLGLVLGATIALGIGGLAVGERFQEKATAARAEAMA 203
           +   LV+     L  +    W DWRL L L  T+ + I GL     F      AR     
Sbjct: 131 VAIDLVAAASAPLLFLAVLTWVDWRLSLALMVTLPMAIIGLNAARGF----FLARGRTKQ 186

Query: 204 TLNSRT----LEFLSGIHVIRSFGLGARRSLRLGEAIEGARKTSKALTARYVVAAILVPL 259
           TL   T    +EF++G+  +R F   A    RL       R+ S  + A    +  L  L
Sbjct: 187 TLVQETSGLIVEFVTGLKTLRLFNQTAPWLDRLDRRFAALREISLGVEAWGGGSIQLYRL 246

Query: 260 IVAVGCAMVISLAILFLSLGWMDPFGFLFFVFVCLRLTDPIRDLVDFSSILQQMVGSAGR 319
            +  G   ++  A    + G +DP  ++ F  V  +L +P+ D   F + L+ MV + GR
Sbjct: 247 CLEGGLVSLLLTAGWLANRGALDPLAWVLFALVAGKLLEPLLDAAAFLTELRLMVLAEGR 306

Query: 320 LLDLLATPVEAEGTSPAPSDRTVRFEEVGFAHGGEAPILDGLSFVLAPGTITALVGGTGA 379
           +  L A P+  EGT+   +   V F+ V F +  +A +L  +SF +  GT+TA+VG +G+
Sbjct: 307 IAALRAEPLLPEGTATLAAAGEVAFQNVSFRYD-DAWVLRDVSFRVGAGTMTAIVGPSGS 365

Query: 380 GKTTALRLLSRHWTPTKGRVTVGGVDLSSLSRHAFSNLVGIVSQTVVLFSLSARDNIRLV 439
           GKTT L LL+R + P  G VT+ G D+ +L        +G V Q V LF  +  +N+ + 
Sbjct: 366 GKTTLLHLLARFFDPQAGAVTIAGRDIRTLDTQDLYRHLGFVFQDVQLFDGTLLENLLIG 425

Query: 440 RPQATDAEVERAARAARCDGFIKAMPQGYDTLLVNAGATLSGGERQRLALARLFLRDCPI 499
           RP A +A V  A  AA CD F+  +P G  + +   G  LSGGERQRL++AR  L+D PI
Sbjct: 426 RPGADEAAVAAACTAAYCDPFLARLPDGLASRIGENGQRLSGGERQRLSIARAILKDAPI 485

Query: 500 LLFDEATSALDVENEHLVQEAMSELVRGRTVLVVAHRLWTIKGADQILVLDQGRIIERGD 559
           LL DEAT+++D   ++ +Q A+S L +GRTV++VAHRL TI+ ADQILVLDQGRI+E+G 
Sbjct: 486 LLLDEATASVDPAAQYEIQRALSHLAQGRTVIMVAHRLHTIRHADQILVLDQGRILEQGR 545

Query: 560 HDALIAAEGFYHQSW 574
           HD L+A  G Y   W
Sbjct: 546 HDDLLAQAGLYAALW 560