Pairwise Alignments

Query, 577 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 597 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  272 bits (695), Expect = 3e-77
 Identities = 194/575 (33%), Positives = 278/575 (48%), Gaps = 28/575 (4%)

Query: 5   LWELLKPYRWRMALAMGLRAVAGLASLLPWVLVSWWADTLVTGGAGAEGAPMGAIPGLVA 64
           L  +L P R R+AL+  L A   + +L+P   ++  A   ++     E A  GAI   +A
Sbjct: 22  LSRVLSPIRGRLALSAVLAAAGSMLALVPLAGIAHIAHLALS-----ETATSGAIGRAIA 76

Query: 65  ATMVVWLVSQAL---AVHLAHGVDADLCGDLRRRLLTHLERAPLDWFSRQGQDGVARLAD 121
           A++        L   A  LAH  D  +   LR  +   L + PL WFS +    V R   
Sbjct: 77  ASIASLFTGMTLITAAEMLAHQADNHITHHLRVAIGQRLMQVPLGWFSERASSEVKRAMQ 136

Query: 122 QDVRALHQLVAHAPTDLS---SLVVVPFAALLCLAWLQPALLVFCLVPLAAAAAGFALLR 178
            D+  LH L AH  T L      V++  A L  + W    L V  L+P  A    F L  
Sbjct: 137 DDIGTLHSLTAHFFTTLGRTVGAVLISVAYLFAMDW---RLAVVVLLPFPA----FFLFL 189

Query: 179 SPAYRDEGTRRD---AALERLSVDYGEFAQNLPLARQYPGAG-VQRGVELSAKGFESAFS 234
             A +          A + R+     EF   +PL + + G G  Q     +   F + F+
Sbjct: 190 HRAIKASAAHMGDVVAGMARIDNAVVEFVNGMPLVKAFGGRGNAQDRYRAAVDAFANTFT 249

Query: 235 AWVKRVGHVAALIELVLGGPWLMAWVLLGAMALAVLGM--PLAVGPLCAFLLLTRAMAAP 292
            + + +    A    ++    ++  VLL  MA   LG   PL + P   F L+   + AP
Sbjct: 250 GFTRPLVAAMARANALIAPVTVVGVVLLAGMAFVALGWIEPLQILP---FALVAPGLCAP 306

Query: 293 IQAMGHGADALMGARAAAERLQAVCDLPPLSEGRAGQIPRDGSVVVRGLRFSY-PDREVL 351
           +Q + +    L  A  AA+R+Q + D P L     G +P    + V  L  +Y P   VL
Sbjct: 307 LQLLHYITHDLNNAVGAAQRVQVLLDTPVLPAPAVGSLPNGSELRVEQLSHAYAPGNNVL 366

Query: 352 KGVDLDLAEGGLNALVGPSGSGKSTMLHVLARHMDPQAGTILVGGVPLRDLPDAVRHRHI 411
             V   LA G   A+VGPSG+GKST+  +L R  DP AG I +GGV LR +     +R I
Sbjct: 367 DDVSFTLAPGTTTAIVGPSGAGKSTLARLLLRFFDPDAGRITLGGVDLRQIESRELYRRI 426

Query: 412 VMLTQQAVALDLSLRENIALLCPEAKFEDIRQAARDARLDDAIMALPRGYDSLSGRDVKL 471
             + Q+   +  S+ +NIAL  P A  E +  AAR A +   I+ LPRGYDS+ G D +L
Sbjct: 427 GFVLQEVRLIHASVADNIALGKPAATREQVEAAARLANIHTRILQLPRGYDSVVGEDAQL 486

Query: 472 SGGEVQRLALARALLSSARLFLLDEPTSATDPQTAQALHRAVRERLAGRTRLIVCHRLSE 531
           SGGE QRL++ARA+L    + +LDE T+A D ++  A+  A+     GRT L++ HRL  
Sbjct: 487 SGGEQQRLSIARAVLLDPPVLVLDEATAAADAESEAAIQDALSRFARGRTLLVIAHRLDT 546

Query: 532 VSDADRIVVCHEGRFVAQGTHAHLLSSGGLYADLW 566
           V  AD+I+V  +G    QG H+ LL+  GLYA LW
Sbjct: 547 VMHADQILVLDQGALCEQGRHSELLNRQGLYARLW 581