Pairwise Alignments

Query, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  235 bits (600), Expect = 8e-67
 Identities = 128/294 (43%), Positives = 185/294 (62%), Gaps = 8/294 (2%)

Query: 9   TETPASRRQARWGALARGGVALLGNRLVCGGLAVVIALGVVAVFAPALAPYDPLVQDLSQ 68
           T +  ++  A  G L     A   NR    GL  +I L +VA+FAP +AP+ P   + + 
Sbjct: 6   TVSAGAKSTAPPGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAV 65

Query: 69  RLRPP------SAAHWLGTDHLGRDIFSRVLCGTPITLSI-VTIAALTVLPVSLIIGMVA 121
            L+PP      S ++ LGTD +GRDI SR++ G  ++LSI V + AL+V+ V +++G++A
Sbjct: 66  FLQPPAWQQGGSTSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVV-VGVVLGLIA 124

Query: 122 GFFGGIVDAVLMRTTDVFLSFPLLVLALALAAALGPGLVNAVIAIALTAWPPLARLVRAE 181
           GFF G+++  +MR  D+ L+ P L+LA+ + A LGPGLVNA++A+A+   P   R+ RA 
Sbjct: 125 GFFRGVLEIAIMRLMDIVLTLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAA 184

Query: 182 TRRLKQADFVAATRLQGASALRLLSFDILPLVLPAALTRLSLDLAGMILIAASLGFLGLG 241
                  D+V A R+ GA  LRL+  ++LP      + + SL ++  IL AA+LGFLGLG
Sbjct: 185 VIAEVSRDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLG 244

Query: 242 AQPPSPEWGAMVAAGRTFLMDQWWVATLPGVAIFIVSFAFNLLGDGVSEVLDPK 295
           AQPPSPEWG M+A  R F++  WWV T PG+AI +   AFNLLGDG+ + LDPK
Sbjct: 245 AQPPSPEWGTMLADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPK 298