Pairwise Alignments

Query, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 277 a.a., putative D,D-dipeptide transport system permease protein DdpC from Escherichia fergusonii Becca

 Score =  288 bits (738), Expect = 7e-83
 Identities = 138/257 (53%), Positives = 185/257 (71%)

Query: 39  GLAVVIALGVVAVFAPALAPYDPLVQDLSQRLRPPSAAHWLGTDHLGRDIFSRVLCGTPI 98
           GL +++ L ++A+FAP LAP+DP  QD + RL+ PS  HWLGTD  GRD+ SR++ G+  
Sbjct: 19  GLIIILLLMLIALFAPWLAPHDPNWQDAAARLQAPSRQHWLGTDSYGRDLLSRLIYGSRP 78

Query: 99  TLSIVTIAALTVLPVSLIIGMVAGFFGGIVDAVLMRTTDVFLSFPLLVLALALAAALGPG 158
            L +V +  +  LPV L+IG++AG++GG ++ VLMR TDV +S P L+LA A  A LGPG
Sbjct: 79  ALGLVALVTIITLPVGLLIGILAGYYGGWLERVLMRFTDVVMSMPRLILAFAFVAMLGPG 138

Query: 159 LVNAVIAIALTAWPPLARLVRAETRRLKQADFVAATRLQGASALRLLSFDILPLVLPAAL 218
           LVN  +A+ALT WP  AR  R+E +RL+ +D++AA  + G    RLL+  ILPL LP+A+
Sbjct: 139 LVNGALALALTTWPAYARQARSEIQRLRHSDYLAAAEMMGIRGRRLLAGHILPLCLPSAI 198

Query: 219 TRLSLDLAGMILIAASLGFLGLGAQPPSPEWGAMVAAGRTFLMDQWWVATLPGVAIFIVS 278
            RL+LDLAG+IL AA LGFLGLGA+PP  EWGAM+A G   + DQWW+A  PG  I I S
Sbjct: 199 VRLALDLAGIILAAAGLGFLGLGARPPMAEWGAMIADGMQVIFDQWWIAAAPGAIILIAS 258

Query: 279 FAFNLLGDGVSEVLDPK 295
            AFNLLGDG+ +VL+P+
Sbjct: 259 LAFNLLGDGLRDVLEPQ 275