Pairwise Alignments

Query, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  324 bits (831), Expect = 1e-93
 Identities = 163/293 (55%), Positives = 216/293 (73%), Gaps = 2/293 (0%)

Query: 6   WLFTETPASRRQARWGALARGGVALLGNRLVCGGLAVVIALGVVAVFAPALAPYDPLVQD 65
           WL ++ P SR+QAR G           NRL   GL ++IAL  VA+FA  LAP++P+  D
Sbjct: 15  WLLSDRPTSRKQARLGRAYVIWRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGD 74

Query: 66  L-SQRLRPP-SAAHWLGTDHLGRDIFSRVLCGTPITLSIVTIAALTVLPVSLIIGMVAGF 123
           L + RL PP +A + LGTD  GRDI SR++ G+ +TL +V + A+   P+ LI+G V+G+
Sbjct: 75  LRNARLLPPGTAGYLLGTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGY 134

Query: 124 FGGIVDAVLMRTTDVFLSFPLLVLALALAAALGPGLVNAVIAIALTAWPPLARLVRAETR 183
            GG VDA+LMR TD+FL+FP LVLALAL AALGPG+ NAV+AIA+T+WPP AR+ RAET 
Sbjct: 135 AGGWVDAILMRITDIFLAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETM 194

Query: 184 RLKQADFVAATRLQGASALRLLSFDILPLVLPAALTRLSLDLAGMILIAASLGFLGLGAQ 243
             + +DF+AA +L GAS  R++   ++PL L + + R++LD+AG+IL AA LGFLGLGAQ
Sbjct: 195 TFRNSDFIAAVKLMGASPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQ 254

Query: 244 PPSPEWGAMVAAGRTFLMDQWWVATLPGVAIFIVSFAFNLLGDGVSEVLDPKE 296
           PP PEWGAM+A+GR F++DQWWVA +PG+AI IVS  FNLLGDG+ + LDPKE
Sbjct: 255 PPLPEWGAMIASGRRFILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDPKE 307