Pairwise Alignments

Query, 384 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Rhodospirillum rubrum S1H

Subject, 419 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  191 bits (486), Expect = 2e-53
 Identities = 138/406 (33%), Positives = 210/406 (51%), Gaps = 48/406 (11%)

Query: 11  RRVSRKIRVGSVFVGGDAPVSVQTMTNTLTTDVAATVAQIRRAQEAGADIVRVSCPDEES 70
           RR S  +++G V VGG APV VQ+MTNT T D A+T  QI     AG+++VR++     +
Sbjct: 17  RRPSVAVQIGKVTVGGGAPVVVQSMTNTDTEDPASTAKQIAELARAGSELVRITVNTPTA 76

Query: 71  TAALKAIISQ-----VEVPIVADIHFHYKRAIEAAEAGAACL---RINPGNIGSAERVRE 122
            AA+  I  +     VEVPIV D H++  + +E   A A  L   RINPGN+G  ++   
Sbjct: 77  AAAVPRIAERLAMMGVEVPIVGDFHYNGHQLLEREPACAEVLAKYRINPGNVGFGKKHES 136

Query: 123 ----VVRAAKDHGCSMRIGVNAGSLEKELLE-------KYGEP------CPEAMVESALS 165
               ++  A  +G  +RIG N GSL++ +L        +  EP        EA++ SAL 
Sbjct: 137 QFGAIIDKALRYGKPVRIGANWGSLDQGMLTALMDENARRAEPWDASHVAREALIRSALD 196

Query: 166 HARILEDNDFTEFKI--SVKASDAFLAVAAYKALAEACDYPLHLGITEAGGLRGGTVKSA 223
            A + E       +I  S K S     +A Y+ LA  CDY LHLG+TEAG    G   S+
Sbjct: 197 SAVLAEKIGLPRERIILSCKVSGVQELIAVYRDLAARCDYALHLGLTEAGMGSKGITASS 256

Query: 224 IGIGSMLWAGIGDTIRVSLSAQP----EEEVKVGFEILKSLNLRHRGVRVVSCPSCARQG 279
             +  +L  GIGDTIR+SL+ +P      EV V  E+L+++ LR     V +CP C R  
Sbjct: 257 AALAVLLQEGIGDTIRISLTPEPGASRTGEVIVAQELLQTMGLRSFTPLVTACPGCGRTT 316

Query: 280 FDVIKTVEVLESRLSHI--QTPI-----------TLSIIGCVVNGPGEARETDIGLTGGG 326
            +  +  E+ ++   H+  Q P+           TL+++GC+VNGPGE++  +IG++  G
Sbjct: 317 SEFFQ--ELAKTVQEHVREQMPVWRVKYDGVENLTLAVMGCIVNGPGESKHANIGISLPG 374

Query: 327 NLAKEGALNKVYVSGIPDHTINNEAMVDHLVALVEKKAAEIEALEA 372
           N   E     V++ G    T+  + + +  V +++   A   A+ A
Sbjct: 375 N--GEAPAAPVFIDGEKAMTLRGDNIANEFVGILDDYVARKYAVRA 418