Pairwise Alignments

Query, 384 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Rhodospirillum rubrum S1H

Subject, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas putida KT2440

 Score =  423 bits (1087), Expect = e-123
 Identities = 219/369 (59%), Positives = 272/369 (73%), Gaps = 7/369 (1%)

Query: 9   ISRRVSRKIRVGSVFVGGDAPVSVQTMTNTLTTDVAATVAQIRRAQEAGADIVRVSCPDE 68
           I RR SRKI VG+V VGGDAP++VQ+MTNT T DVAATVAQI+R  +AG DIVRVS PD 
Sbjct: 7   IKRRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDM 66

Query: 69  ESTAALKAIISQVEVPIVADIHFHYKRAIEAAEAGAACLRINPGNIGSAERVREVVRAAK 128
           ++  A   I  +V VP+VADIHF YK A+  AE G  CLRINPGNIG  +RVR VV AA+
Sbjct: 67  DAAEAFGKIKQRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGREDRVRAVVDAAR 126

Query: 129 DHGCSMRIGVNAGSLEKELLEKYGEPCPEAMVESALSHARILEDNDFTEFKISVKASDAF 188
           D G  +RIGVNAGSLEK+L +KYGEP P A+VESAL H   L+  DF +FK+SVKASD F
Sbjct: 127 DRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESALRHVEHLDRLDFQDFKVSVKASDVF 186

Query: 189 LAVAAYKALAEACDYPLHLGITEAGGLRGGTVKSAIGIGSMLWAGIGDTIRVSLSAQPEE 248
           +AV AY+ LA+    PLHLGITEAGGLR GTVKSA+G+G +L  GIGDTIR+SL+A P E
Sbjct: 187 MAVEAYRLLAKQIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVE 246

Query: 249 EVKVGFEILKSLNLRHRGVRVVSCPSCARQGFDVIKTVEVLESRLSHIQTPITLSIIGCV 308
           EVKVG++ILKSL+LR RG+  ++CPSC+RQ FDV+KT+  LE RL  +  P+ +++IGCV
Sbjct: 247 EVKVGYDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDVAVIGCV 306

Query: 309 VNGPGEARETDIGLTGGGNLAKEGALNKVYVSGIPDHTINNEAMVDHLVALVEKKAAEIE 368
           VNGPGEA+E  +GLTG       G  N +Y+ G P   + N+ +VD L  L+ +KAAE  
Sbjct: 307 VNGPGEAKEAHVGLTG-------GTPNLIYIDGKPAQKLTNDNLVDELEKLIRQKAAEKA 359

Query: 369 ALEAARKAK 377
             +AA  A+
Sbjct: 360 EADAALIAR 368