Pairwise Alignments

Query, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 294 a.a., EamA family transporter RarD from Pseudomonas fluorescens SBW25

 Score =  214 bits (544), Expect = 3e-60
 Identities = 121/286 (42%), Positives = 169/286 (59%), Gaps = 9/286 (3%)

Query: 15  AGSSARGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAA 74
           A +  +G    L AY +WG+ PL+FKA++ V A EI+ HRVLW+  + G  L +  +   
Sbjct: 3   AANPRKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWS-ALFGALLLMVWKHPG 61

Query: 75  SLRFLAN--RRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLV 132
             R L +  +R+ +L L+ ++ I+ NWLT++ +  SG  ++ SLGYYI PLV VVLG L+
Sbjct: 62  WFRELRDNPKRLAILALSGSL-IAGNWLTYVWSVNSGRMLEASLGYYINPLVNVVLGMLI 120

Query: 133 LGEEMSRRQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLF 192
           LGE + R Q +AV LAA GV   +W+ GSLPW+SL LA TF  YGLIRK   V  L GL 
Sbjct: 121 LGERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180

Query: 193 IEALLLSPVLIGLLAWIELKGGGLAFFDGPWGRS--LWLMALGPLTAVPLFFFTWAARRL 250
           +E  +L P+ +   AW+       +     W  S   WL+A GP+T +PL  F  AAR L
Sbjct: 181 VETWMLVPIAV---AWLLFNPSAHSAQMVFWSTSEAWWLVAAGPVTLIPLVCFNAAARHL 237

Query: 251 RLSTLGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALY 296
             + LG +QY  PT+    A L+F E +  + L  F FIWAG+ +Y
Sbjct: 238 PYTALGFLQYVAPTLVLLEAVLLFGEHLAPSTLTAFAFIWAGLVVY 283



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 165 ISLTLASTFALYGLIRKTVSVPPLAGLFIEALLLSPVLIGLLAWIELKGGGLAFF-DGPW 223
           + L+    + L+ L  K ++  P A + +  +L S +   LL  +    G      D P 
Sbjct: 12  LGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGALLLMVWKHPGWFRELRDNP- 70

Query: 224 GRSLWLMAL-GPLTAVPLFFFTWAARRLRLSTLGVIQYTNPTIQFALAALVFKEPVTTTE 282
            + L ++AL G L A     + W+    R+    +  Y NP +   L  L+  E +   +
Sbjct: 71  -KRLAILALSGSLIAGNWLTYVWSVNSGRMLEASLGYYINPLVNVVLGMLILGERLRRLQ 129

Query: 283 LLTFGFIWAGVALYLWPVRKDP 304
            +  G    GVA  +W V   P
Sbjct: 130 WVAVGLAAVGVAQQVWQVGSLP 151