Pairwise Alignments

Query, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., EamA family transporter RarD from Dickeya dianthicola 67-19

 Score =  221 bits (564), Expect = 1e-62
 Identities = 120/277 (43%), Positives = 162/277 (58%), Gaps = 1/277 (0%)

Query: 20  RGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAASLRFL 79
           +GV  ALGAY +WGI+P++FK + +V A EILSHR++W+   M + L L  +        
Sbjct: 8   QGVLFALGAYIIWGIAPVYFKRLGQVPADEILSHRIIWSFFFMLLLLSLSRKWGVVRNAC 67

Query: 80  ANRRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLVLGEEMSR 139
              R  LL+      ++ NWL +I A    H ++ SLGY+I PLV+V+LG L LGE    
Sbjct: 68  RRPRQLLLLAITATLVACNWLIYIWAVNHNHMLEASLGYFINPLVSVLLGMLFLGERFRP 127

Query: 140 RQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLFIEALLLS 199
            Q LA+ LA  GV + LW  GSLP I+LTLA +F +YGL+RK +++    G+  E L L 
Sbjct: 128 TQWLAMLLAMGGVLVQLWTLGSLPIIALTLAFSFGIYGLLRKKIAIDGQTGMLFETLWLL 187

Query: 200 PVLIGLLAWIELKGGGLAFFDGPWGRSLWLMALGPLTAVPLFFFTWAARRLRLSTLGVIQ 259
           P  +  L W+            P   +L LMA G +T VPL  FT AA RLRLSTLG  Q
Sbjct: 188 PAALVYLEWL-ADSPTSHLSQNPTSLNLLLMAAGIVTTVPLLLFTSAAMRLRLSTLGFFQ 246

Query: 260 YTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALY 296
           Y  PT+ F LA LV+ E +T   L+TF FIW  +A++
Sbjct: 247 YLAPTLTFLLAVLVYGETITPDRLVTFAFIWLALAVF 283



 Score = 29.3 bits (64), Expect = 1e-04
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 1/81 (1%)

Query: 225 RSLWLMAL-GPLTAVPLFFFTWAARRLRLSTLGVIQYTNPTIQFALAALVFKEPVTTTEL 283
           R L L+A+   L A     + WA     +    +  + NP +   L  L   E    T+ 
Sbjct: 71  RQLLLLAITATLVACNWLIYIWAVNHNHMLEASLGYFINPLVSVLLGMLFLGERFRPTQW 130

Query: 284 LTFGFIWAGVALYLWPVRKDP 304
           L       GV + LW +   P
Sbjct: 131 LAMLLAMGGVLVQLWTLGSLP 151