Pairwise Alignments

Query, 388 a.a., Predicted signal transduction protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 365 a.a., HDOD domain-containing protein from Dickeya dianthicola ME23

 Score =  194 bits (493), Expect = 3e-54
 Identities = 113/353 (32%), Positives = 188/353 (53%), Gaps = 24/353 (6%)

Query: 5   ILFVDDDINLLQALQRMLRGYRAEWEMVFVDDPRKALALLATRRFDVVVSDMRMPDLDGA 64
           ++FVDD+  +L  ++R L    +EWE  F +  ++ALA+L  +  DVVVSDMRMP +DGA
Sbjct: 3   VMFVDDESRVLSGIERALMMQDSEWECRFANSGQEALAMLEEKPADVVVSDMRMPFMDGA 62

Query: 65  QLLSEVERLHPGTVRVILSGYAEESSLFRSVGPAHQYLSKPCDPEAILALMARSWRLREI 124
           +LL+ V    PGT+R+ILSGY+E  ++ R V  AH++++KPCD   +L ++A +  LR++
Sbjct: 63  ELLTRVRNRWPGTIRIILSGYSEPDAILRMVDVAHRFVAKPCDSTVLLEMVASALALRDM 122

Query: 125 LADPALRDLAASLRTLPSPPDLYLRLTAAMADPAVNTSTIARMIAEDMAMTAELLKITNS 184
             DPA+ ++      LP+ P ++  L   +ADP  +T  IA ++  + A++A+++++ NS
Sbjct: 123 FQDPAVVEIVGRTSRLPAAPKVFADLCRLIADPGSDTRHIAGLLGSEPALSAKIMQLANS 182

Query: 185 SYFALPSRITTAAQAVRLLGLETVCVLVLHAGIFRQFQGHPGLGEILRALSGHGVAKGLL 244
           +YF     I     A+  LGL+ V +LVL + +F   +  P +  + +          LL
Sbjct: 183 AYFTRGGHINDIGNAITHLGLDQVKLLVLASQVFADAKTDPYVDRLQQ--------NALL 234

Query: 245 AQKLAAEDGADEAVRAQAHCAGMMADIGALVLLDAYPDAFQTMIAKAGRGKLEAVERAAF 304
           A  LAA     + +      A ++A+I  L             I +      +A      
Sbjct: 235 ASTLAARISGHQGLEP---TAALLANIALL-------------IPELRESDDKATTTRGD 278

Query: 305 GASHAQLGAFILGLWGFPDPVIEAVLYQWHPSQCLNQGRGALSYVHLACVRGN 357
              HA + A++L LWG P  ++EAV     PS+  ++  G +  VH+A    N
Sbjct: 279 TPIHAAVSAYLLALWGLPMDIVEAVACHTQPSRSADKTFGVIGAVHVAVTLAN 331