Pairwise Alignments

Query, 450 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 2e-34
 Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 3/203 (1%)

Query: 240 RDGSVHWIRETADVLRES-DGTPRRMVGVIREVTEEKEAQRQALRIAMLDPLTGLPNRAT 298
           +DGS++W+  T   L +   G  R+ V +  +VTE+++           D LTGLPNRA 
Sbjct: 82  KDGSLYWVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQWRVGHDVLTGLPNRAY 141

Query: 299 FLERLEADLGQVDETGVAVPLALAFIDLDDFKPINDTYGHLMGDRVLMTIAKRLSEAVRP 358
             + L   L      G++  LA+  +DLD FK +ND YGH +GD +L+ +A+RL   +R 
Sbjct: 142 LSDLLNQALAYSRCEGIS--LAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQRLKSILRG 199

Query: 359 QDMVARVGGDEFVALLRGCRDGARARTVAARLLDAVTAPVSIDTVIHRVRASIGISLYPS 418
            D VAR+ GDEFV +LR   D  +      R+L A+ AP  +      + ASIG++LYP 
Sbjct: 200 GDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSLSASIGVTLYPQ 259

Query: 419 LVSTGDDLIATADQAMYVAKRAG 441
                D L+  ADQAMYVAK+ G
Sbjct: 260 DDEDADTLVRHADQAMYVAKQRG 282