Pairwise Alignments

Query, 338 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 353 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  304 bits (778), Expect = 3e-87
 Identities = 168/335 (50%), Positives = 224/335 (66%), Gaps = 17/335 (5%)

Query: 1   MSGPSTSTSPILSVRDLRVTFSLPPRRLFGGPVALKAVDGVSFDVAAGETLGIVGESGCG 60
           + GP+    P+L+V  L   F +    LF     ++AVD VSF VA GETLGIVGESGCG
Sbjct: 10  LGGPA---QPLLAVNSLTKHFPIGGG-LFAEKKTVRAVDDVSFTVAKGETLGIVGESGCG 65

Query: 61  KSTLGRALLQLIPPTSGEVVWLGRDIAGLRSRAMRPLRRDLQIIFQDPLASLDPRMTIGD 120
           KST  R L+ L+P TSGE+++ G+ +    S ++R  RR +Q++FQD  ASL+PR+TI D
Sbjct: 66  KSTTARLLMHLMPRTSGEILFDGQVVG--YSLSVREFRRGMQMVFQDSYASLNPRLTIED 123

Query: 121 IIAEPLITHHPEMTAETLRQRVRAMMDEVGLLPQML-NRYPHEFSGGQCQRIGIARAMIL 179
            IA     H   ++ +  R   R +M +VGL P++  NRYPHE SGGQ QR+ IARA+ L
Sbjct: 124 SIAFGPKVHG--VSDKEARALARELMGKVGLRPEVFANRYPHEVSGGQRQRVNIARALAL 181

Query: 180 EPKLIVCDEPVSALDVSIQAQIVNLLQDLQKRFGLSLLFISHDLSVVRHISHRILVLYLG 239
           +P+L++ DE VSALD S++AQ++NLL DL+  FGL+ +FISHDL+VVR+IS R+LV+YLG
Sbjct: 182 KPRLVILDEAVSALDKSVEAQVLNLLTDLKHEFGLTYVFISHDLNVVRYISDRVLVMYLG 241

Query: 240 RVMEIADRDGLYDRPRHPYTRALISAVPIADPRKEREKPRLILGGDLPSPIDPPSGCVFR 299
           +V+E+   D +++ P HPYTRAL++A+P  DP K  E P   L GD P+PIDPP+GC F 
Sbjct: 242 QVVEVGPVDQVWEAPAHPYTRALLAAMPALDPDKRTETPP--LSGDPPNPIDPPAGCRFH 299

Query: 300 TRCPFARARCANEVPVLRPTGPG------HQAACH 328
           TRC FA   C    P L P  PG      H AACH
Sbjct: 300 TRCSFAEEVCGRVGPALSPATPGDTAPDAHLAACH 334