Pairwise Alignments

Query, 259 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  154 bits (389), Expect = 2e-42
 Identities = 90/251 (35%), Positives = 135/251 (53%), Gaps = 16/251 (6%)

Query: 12  LLVVDGLVKAFGGVRAVDGVSFVLRAGESAALIGPNGAGKSTLFSLIACQRRPDAGTVRM 71
           +L V GL   FGG+ AV+GV+  ++  +  ALIGPNGAGK+T+F+ +    +P  GT+ +
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 72  EGRLLTGRPAHALAGYGIGRTFQIARAFSSLGVFEAARTAARVGL--------------- 116
           +G+ + G   H +A  G+ RTFQ  R F  +   E    A    L               
Sbjct: 65  DGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFKTPSFR 124

Query: 117 -PRAEADRRAGDLIARLGLTGLADATVATLSYGDIKRLELAIALAGRCRLLLMDEPAAGM 175
               EA  RA   + ++ LT  A+ T  TL+YG  +RLE+A  +  + R++++DEPAAG+
Sbjct: 125 RSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEPAAGL 184

Query: 176 APAERRALMELVGALAAEEGVTVLFTEHDMDVVFGHARRVMVLHHGRLIADGPPERIRAD 235
            P E   L  L+  L     VTVL  EHDM +V   +  ++V++ G  +A G PE+IR +
Sbjct: 185 NPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQIRDN 244

Query: 236 SRVRSVYLGES 246
             V   YLGE+
Sbjct: 245 PDVIKAYLGEA 255