Pairwise Alignments

Query, 595 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

Subject, 430 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  184 bits (468), Expect = 5e-51
 Identities = 149/436 (34%), Positives = 210/436 (48%), Gaps = 40/436 (9%)

Query: 173 RPGDAAAWSSLGAGLGESGLDEEAEKALRRAVALAADEPDWTYNLAHFLIERDRLEDALP 232
           +P D   WS+LGA L ++G  E A    RRA+ +         NL + L + ++  DA+ 
Sbjct: 9   KPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIA 68

Query: 233 LLDAAVARAPERAHYHTNLGVCRLGLGDIKGAIAAHRQALALDPDEPEARYDLAWALLLA 292
             + AV  +   A+  +NL V          A+     AL   P++P   +D A  LL  
Sbjct: 69  AQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQV 128

Query: 293 GAWEEGWAAHEARWRMGRFTGRRAAGPAPTDWPMPLWDGQPLGPGRTLLLHAEQGFGDSL 352
           G + EG+  +++R  +  +  R A G         +WDG PL  G+T+LL  EQGFGD L
Sbjct: 129 GRYAEGFRDYDSRLSLPSYQNRIADGT--------MWDGGPLD-GKTILLTTEQGFGDVL 179

Query: 353 MMSRLIIPALARAGDAQGIIECPPSLVGLLAQSLGPALGPAVRVVAQAESP-PAADAHLP 411
           + +R      AR G    ++EC P L  LL+   G      +    +A +P P  D H P
Sbjct: 180 LTARYAPMVKARGGRV--LLECHPELHRLLSGLEG------IDGFVRAGTPYPPYDVHCP 231

Query: 412 LMSLPHRLGVDSETIPGPDRWL----RAEPAPR---PPSSPPRVGLVWAGDPGNRMDRLR 464
           LMSLPHRLG   +T+P P R        E A R    P    +VG++W+G    + D  R
Sbjct: 232 LMSLPHRLGTTIDTVPPPTRLTVTAEAREKAARLVPGPDGTIKVGIIWSGRVTFK-DNAR 290

Query: 465 SCPATALRPLFDRVKDAGLDIAWTGLQLGPPAADLPDLPAA--LAPGG----DFAATARV 518
                +    F  V +  L      +Q GPP A+L  L  +  + P G    DFA TA V
Sbjct: 291 RATTLSRFLRFLNVPNVRL----YSIQKGPPEAELETLGTSTLITPLGQHFNDFADTAAV 346

Query: 519 VAALDLVIGVDTAVIHLAGGLGVETWVMLAYVPDYRWMMDR----DDSPWYPSARLFRQS 574
           +  LDLVI  D++V HLAG LG   W +L ++P + +   +    D +PWYPS RLFRQ+
Sbjct: 347 LERLDLVIMTDSSVAHLAGSLGRPVWNLLQFMPYWVYGDGKGEWADTTPWYPSMRLFRQT 406

Query: 575 RRGDWRGVIAQVAAAL 590
             GDW  V A    AL
Sbjct: 407 TPGDWDSVFAAAEQAL 422



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 37  VLDRHPGHGPALAGLGRILLGLGQPTAALESLGAAVAADPTRLDWLADLAVALAGARRPA 96
           +L++ P      + LG +L   G+P AA+     A+  D   +    +L   L    + A
Sbjct: 5   MLEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYA 64

Query: 97  EALSAAEGLPATAGA----LGFRADRLEELGRRDQAIALLDDALRRHPDEAELHRRQGVL 152
           +A++A E     +G     L      L    R ++A+ +LD ALR  P++  L   + + 
Sbjct: 65  DAIAAQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALT 124

Query: 153 LRRAGRAAQAIAPWRALVAL-----RPGDAAAW 180
           L + GR A+    + + ++L     R  D   W
Sbjct: 125 LLQVGRYAEGFRDYDSRLSLPSYQNRIADGTMW 157



 Score = 32.7 bits (73), Expect = 3e-05
 Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 4/120 (3%)

Query: 21  LREGGAPAEARDLYRLVLDRHPGHGPALAGLGRILLGLGQPTAALESLGAAVAADPTRLD 80
           LR+ G P  A    R  L+    H  A   LG +L  + Q   A+ +   AV       +
Sbjct: 23  LRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIAAQEHAVVLSGGNAN 82

Query: 81  WLADLAVALAGARRPAEALS----AAEGLPATAGALGFRADRLEELGRRDQAIALLDDAL 136
            L++L VAL    R   AL     A    P   G L  RA  L ++GR  +     D  L
Sbjct: 83  LLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQVGRYAEGFRDYDSRL 142