Pairwise Alignments

Query, 245 a.a., Flagellar hook capping protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 231 a.a., flagellar basal body rod modification protein D (NCBI) from Escherichia coli BW25113

 Score = 93.2 bits (230), Expect = 4e-24
 Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 12/222 (5%)

Query: 4   LTAEASTAAGAAAATKAGKSRGKLTSDMNTFLTLLTSQLKNQDPLSPMDSTEFTNQLVQF 63
           +T    T  G +  + +  +        ++FLTLL +QLKNQDP +PM++ E T+QL Q 
Sbjct: 5   VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64

Query: 64  AQVEQQINTNDNMEKLLAVSGNSQAAMAVGYLGKYVEAESTVVALQDGQ--------AVF 115
           + V      N  +  +     NSQ+  A   +G  V    T V    G           F
Sbjct: 65  STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124

Query: 116 TYGLTAAADNVTIALYDEKDNLVRAFQ-GDLTQGLHKITWNGKDSYGEKLDDGTYRIAVT 174
              L  AAD VT  + D+   +VR    G+LT G+H  TW+G  + G    +G+Y +A++
Sbjct: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184

Query: 175 ATSKKDGSIETWSTTIGKVTGIASDGKGGTL-LG-LGSTSVD 214
           A S     +         V G+     G TL LG  G+T++D
Sbjct: 185 A-SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLD 225