Pairwise Alignments

Query, 272 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 246 a.a., flagellar motor rotation protein from Pseudomonas putida KT2440

 Score =  114 bits (286), Expect = 2e-30
 Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 11/246 (4%)

Query: 18  DLATVAGIGGALALIVTALVL-GGSPRAFFDLPSILIVVLGTLAVTVASFTVKDIGVTVA 76
           D+ ++ G+  A   IV    L GG   A  + P+ LIV+ GTLA  +    +      + 
Sbjct: 2   DVLSLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLTSFKRALQ 61

Query: 77  MLRPALTQSTRPPRAAAL----KILALADFCRKSGILKIQGPILESLRDEPFLHKGMGLV 132
           +LR  L     PPR        +++  +   RK G+L ++G  +     +P+  KG+ L+
Sbjct: 62  ILRWILF----PPRVDLAGGIDRVVNWSLTARKEGLLGLEG--VADSEPDPYARKGLQLL 115

Query: 133 VDGLPEPDVEAILAQDIHATQQRLARATSVLRRAAEVAPAMGLIGTLIGLVQMLGNLNNP 192
           VDG     + +IL  D+   + R  +A  V       AP +G+IG ++GL+ ++GNL +P
Sbjct: 116 VDGAEPEAIRSILEVDLLTQEGRDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLADP 175

Query: 193 AVIGPSMAVALLTTFYGAIMGNVVFLPLAGKLERNGADDTLVRRIYLVGILSVARKENPR 252
           + +G  +AVA + T YG    N+V LP+A KL+      +  R + L G+LS+A  ENPR
Sbjct: 176 SQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSRYREMLLEGLLSIAEGENPR 235

Query: 253 RLEMLL 258
            +E+ L
Sbjct: 236 SIELKL 241