Pairwise Alignments

Query, 445 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 448 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (661), Expect = 2e-73
 Identities = 149/343 (43%), Positives = 208/343 (60%), Gaps = 28/343 (8%)

Query: 42  DGKGADLVMIDVRLDVNRLMVGMTEERMATPVVAYGVGTDTQAAVRAIKAGAREYIPLPP 101
           +G G  L  ++  + +N L          T V+      D + A+ AI+ GA ++ P P 
Sbjct: 63  NGAGEGLATLEGLISLNPL----------TKVIVSSGNEDHRHALSAIRLGAYDFYPKPV 112

Query: 102 DPELI------AAVLEAVTEESHAL------------VYKDPAMGALVRMAEQIAPSDAS 143
           D E +      AA L  + EE+  L            + +  A+ A+ +M  ++A +  +
Sbjct: 113 DIEHLRLITARAAHLRRLEEENRQLARAGHAGPLANVIGESAAIQAVCQMVRRVASTTVN 172

Query: 144 VLIVGESGTGKEIIARHIHRKSRRAQGRFIAVNCAAIPEALLESELFGHEKGAFTGAVAR 203
           VL++GESGTGKE+ A  +H+ S RA   F+A+NCAAIPE LLESELFGHEKGAFTGA+ +
Sbjct: 173 VLLLGESGTGKEVFAHSLHQLSGRAGQPFVAINCAAIPENLLESELFGHEKGAFTGALRQ 232

Query: 204 RLGKFEEANGGTLLLDEISEMDVRLQAKLLRVLQEREIDRVGGRQPIKVDVRILATSNRD 263
             GK ++ANGGTL LDEI +M   LQAKLLR LQ R I+RVGGRQ ++VDVRI++ +NRD
Sbjct: 233 TTGKIQQANGGTLFLDEIGDMPPPLQAKLLRFLQSRVIERVGGRQSLEVDVRIVSATNRD 292

Query: 264 MEAEVRAGHFREDLFFRLNVITLALPPLRKRPADIDLLADHFARKFADLNGVPYRPLADE 323
           + A +  G FREDL++RL+ + +ALPPLR R  D  LLA +F   FA   G      + +
Sbjct: 293 LGALIEKGEFREDLYYRLDEVKIALPPLRDRIEDAPLLAQYFLDSFAASMGRKVTGFSSD 352

Query: 324 TRQSLRGHSWRGNVRELENTLHRAVLLSSGPRILPEAILLTGG 366
            + +L  H W GNVRELEN + RAV+L+ G  +  + + L GG
Sbjct: 353 AQVALSAHPWPGNVRELENRVKRAVVLAEGRLVTAKDMDLVGG 395