Pairwise Alignments

Query, 445 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 478 a.a., two-component system DNA-binding transcriptional dual regulator GlnL/GlnG from Pseudomonas putida KT2440

 Score =  262 bits (669), Expect = 2e-74
 Identities = 161/413 (38%), Positives = 231/413 (55%), Gaps = 33/413 (7%)

Query: 47  DLVMIDVRLDVNR---LMVGMTEERMATPVVAYGVGTDTQAAVRAIKAGAREYIPLPPDP 103
           D+++ D+R+       L+  + E+    PV+     +D  +AV + + GA EY+P P D 
Sbjct: 50  DVIISDIRMPGTSGLDLLAQIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDV 109

Query: 104 ELIAAVLEAVTEESHA---------------LVYKDPAMGALVRMAEQIAPSDASVLIVG 148
           +   ++++   + +                 ++ + PAM  + R   +++ S+ +VLI G
Sbjct: 110 DEAVSLVKRANQHAQEQQGLDVPQNLARTPEIIGEAPAMQEVFRAIGRLSHSNITVLING 169

Query: 149 ESGTGKEIIARHIHRKSRRAQGRFIAVNCAAIPEALLESELFGHEKGAFTGAVARRLGKF 208
           ESGTGKE++A  +HR S RA   FIA+N AAIP+ L+ESELFGHEKGAFTGA   R G+F
Sbjct: 170 ESGTGKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRF 229

Query: 209 EEANGGTLLLDEISEMDVRLQAKLLRVLQEREIDRVGGRQPIKVDVRILATSNRDMEAEV 268
           E+A+GGTL LDEI +M    Q +LLRVL + E  RVGG  P+KVDVRI+A +++++E+ V
Sbjct: 230 EQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQNLESLV 289

Query: 269 RAGHFREDLFFRLNVITLALPPLRKRPADIDLLADHFARKFADLNGVPYRPLADETRQSL 328
           +AG FREDLF RLNVI + +P L  R  DI  LA HF  + A    V  + L  ET + +
Sbjct: 290 QAGKFREDLFHRLNVIRIHIPRLADRREDIPALARHFLARAAQELAVEPKILKPETEEFI 349

Query: 329 RGHSWRGNVRELENTLHRAVLLSSGPRI----LPEAILLTGGDTANAPAGESTL------ 378
           R   W GNVR++ENT     +++S   +    LP  +L    D A     E  L      
Sbjct: 350 RNLPWPGNVRQMENTCRWITVMASSREVLIGDLPPELLNLPHDAAPVTNWEQALRQWADQ 409

Query: 379 -----TGSLVGRTVADVERDLIIDTLRHTLGNRTHAATILGISIRTLRNKLKQ 426
                  SL+   V   ER +I   L+HT G R  AA +LG    TL  K+K+
Sbjct: 410 ALARGQTSLLDSAVPSFERIMIETALKHTAGRRRDAALLLGWGRNTLTRKIKE 462