Pairwise Alignments

Query, 445 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 484 a.a., nitrogen regulation protein NR(I) from Magnetospirillum magneticum AMB-1

 Score =  275 bits (702), Expect = 3e-78
 Identities = 178/467 (38%), Positives = 247/467 (52%), Gaps = 47/467 (10%)

Query: 4   LIVGSLDGQVGEASRMAMDR-GAQVSQVGGIDQALAFLRDGKGADLVMIDVRLDVNR--- 59
           ++V   D  +      A+ R G +V   G       ++ +G+G DLV+ DV +       
Sbjct: 9   ILVADDDRGIRTVLSQALGRAGYEVRTTGNASTLWRWVSEGEG-DLVITDVVMPDESGLD 67

Query: 60  LMVGMTEERMATPVVAYGVGTDTQAAVRAIKAGAREYIPLPPD-PELIAAVLEAVT---- 114
           L+  M + R    ++          AV+A + GA EY+P P D  EL+  V  A++    
Sbjct: 68  LLPRMKKIRPELRIIVMSAQNTLLTAVKATQRGAFEYLPKPFDLKELVNVVGRALSTPRA 127

Query: 115 ----------EESHALVYKDPAMGALVRMAEQIAPSDASVLIVGESGTGKEIIARHIHRK 164
                     EE   L+ + PAM  + R   ++  +D SV+I GESGTGKE++AR +H  
Sbjct: 128 APTEAAGGEDEEKLPLIGRSPAMQEIYRTLARLMSTDLSVMITGESGTGKELVARALHDY 187

Query: 165 SRRAQGRFIAVNCAAIPEALLESELFGHEKGAFTGAVARRLGKFEEANGGTLLLDEISEM 224
            +R  G F+A+N AAIP  L+ESELFGHEKGAFTGA  R  G+FE+A GGTL LDEI +M
Sbjct: 188 GKRRNGPFVAINMAAIPRELIESELFGHEKGAFTGATQRAAGRFEQAEGGTLFLDEIGDM 247

Query: 225 DVRLQAKLLRVLQEREIDRVGGRQPIKVDVRILATSNRDMEAEVRAGHFREDLFFRLNVI 284
               Q +LLRVLQE E   VGGR PI+ +VRI+A ++RD+   +R G FREDLF+RLNV+
Sbjct: 248 PPEAQTRLLRVLQEGEYTTVGGRTPIRANVRIVAATHRDLTQLIRQGLFREDLFYRLNVV 307

Query: 285 TLALPPLRKRPADIDLLADHFARKFADLNGVPYRPLADETRQSLRGHSWRGNVRELENTL 344
            + LPPLR+R  DI  L  HF  + A   G+P + +  +    LR H W GNVRELEN +
Sbjct: 308 PIRLPPLRERSEDIPELIRHFLAQ-AGAEGLPSKTIDGQAMDRLRKHRWPGNVRELENLV 366

Query: 345 HRAVLLSSGPRI------------LPEAILLTGGDTANAPA--------------GESTL 378
            R   L S   I             P A  ++GG      +              G+   
Sbjct: 367 RRLAALYSQEVIGIEVIEQELVGGTPHADAISGGVEGEGLSATVERHLREYFGNHGDGLP 426

Query: 379 TGSLVGRTVADVERDLIIDTLRHTLGNRTHAATILGISIRTLRNKLK 425
              +  R + +VER L+   L  T GN+  AA +LG++  TLR K+K
Sbjct: 427 PAGVYDRVLREVERPLVTIALEATRGNQIKAAHLLGVNRNTLRKKIK 473