Pairwise Alignments

Query, 368 a.a., GTP-binding signal recognition particle SRP54, G-domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 333 a.a., GTP-binding protein from Magnetospirillum magneticum AMB-1

 Score =  337 bits (863), Expect = 4e-97
 Identities = 185/321 (57%), Positives = 231/321 (71%), Gaps = 5/321 (1%)

Query: 28  MRLKCYTADSMADAMAAIRAELGDDAIIVSTQRASDGNGVRITAALEGDLVEDDIHTAL- 86
           MRLK +TA +MA+AM  +R ELGDDAIIVSTQRA+   GVRITAALE   V+ D+  A  
Sbjct: 1   MRLKSFTAPTMAEAMELVRQELGDDAIIVSTQRAAGSKGVRITAALES--VDADLAVASM 58

Query: 87  --HGTHRTPVGEAVREALEFHGAPARLTELLVNLAAVTPARDAISACASALDQVFRFAPM 144
               T  + V EAVR+AL  HG P++L E LVN A  +       ACA+AL+  F FA +
Sbjct: 59  LEEATGGSEVSEAVRKALVDHGVPSKLVERLVNAAHTSGLSQPPLACAAALEAGFTFAHL 118

Query: 145 PQTAAPRPILLVGPPGTGKTIAVAKLAARARLSGRAVGVITADSVRAGAQEQLAAFTRIL 204
           P+  APRP +LVGP G+GK+IA AKLAAR+ L  R VGVIT D++RAGA EQLAAFT IL
Sbjct: 119 PEHGAPRPFMLVGPNGSGKSIAAAKLAARSVLKQRQVGVITCDNIRAGAVEQLAAFTSIL 178

Query: 205 EIDLKKARGPDGLATLVPNMQQQFGVIFIDSPGLNPFSQDDMDYLRALISAVPMDAALVL 264
           EIDL +ARGP+ LA +V ++   F ++ IDSPGLNPF Q DMDYL+ALI A  ++  LV+
Sbjct: 179 EIDLVRARGPESLARVVESVNGAFDLVVIDSPGLNPFKQSDMDYLQALIEAADVEPVLVM 238

Query: 265 NAGTDPMEAMEIAEAFAEVGASRILATRLDMARRLGGILAAAEAGSLAFGDVSINPHVAN 324
            AG DP EA EI EAFA +GA+R+ A+RLD  RRLG ILAAAE G +AF DVS +PHVA+
Sbjct: 239 AAGGDPEEAAEIGEAFAAIGATRLFASRLDTTRRLGSILAAAEGGQMAFCDVSASPHVAS 298

Query: 325 GLCPITPLSLARLILPLEEES 345
           G+ PI+ ++LARLI+P   E+
Sbjct: 299 GISPISAVALARLIMPQSAEA 319