Pairwise Alignments

Query, 942 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

 Score =  250 bits (638), Expect = 6e-70
 Identities = 191/636 (30%), Positives = 307/636 (48%), Gaps = 33/636 (5%)

Query: 2    DDLLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFLGLPRLESL 61
            ++LL  FL E+S+ + +    L   + +P     + N+ R +HT+KG    + +  +  L
Sbjct: 888  EELLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDL 947

Query: 62   AHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEPEGDDKDLKAHLNA 121
            AH  E +      G L  +     ++ +  DR+  +L  +   +  P      L  ++  
Sbjct: 948  AHELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQ--PLHAATALIDYIRN 1005

Query: 122  FAEGKQPSVAAMAPAPARAAGSGPAISEGGYPVAAELLAEVSEAVAKGKRAATEAELAAE 181
            F      S AA+  +   AAG GP  +       AE+ A   E  A G     +AEL  +
Sbjct: 1006 F------SSAALTDS---AAGQGPPEA-----ATAEIPAAAPER-APGDMVKVDAELLDD 1050

Query: 182  LAAELAAAEKAEQAVAAPVPEVIPEVKAATPVVQPAKPPAVTAAHDTNGPNGGGGGEQKE 241
            L             +   V +    +      ++  +   +    +T G       +Q E
Sbjct: 1051 LGNLAGEHSIIRGRIEQQVNDAQFALNEMETTLERMRDQLLRLDVETQGRISSR--QQFE 1108

Query: 242  GSVASQSIRVNVELLENLMTLVSELVLTRNQLLQMVR--GSDDSEFVAPLQRLSHITTDL 299
            G        + ++    L  L   L  + + LL +         E  + LQ+ + + + L
Sbjct: 1109 GDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRAQEAYSLLQQQARVNSQL 1168

Query: 300  QEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTELDRQVLEMIKDPLTHM 359
            QEG+  T M P      +L R+VR ++ E+ K+++L +  A+ ELDR VLE +  PL HM
Sbjct: 1169 QEGLTATLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEGELDRSVLERMVAPLEHM 1228

Query: 360  VRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDGRGLNLERIRAKALSN 419
            +RN+ DHGLE    R AAGKPE G I LN  HEG  I+IE++DDG G+ LE +R KA+  
Sbjct: 1229 LRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKR 1288

Query: 420  GLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVKTNIEKIGGTVELKTW 479
            GL        ++D +I Q+I R G STAEK+T +SGRG+GMDVV   ++++GG++ +++ 
Sbjct: 1289 GLLDPQ--AQLSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESA 1346

Query: 480  PGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTANSETTIEQINTAPVL 539
             GKG+RF+I++P T++I  AL+V    E++AIP  ++  +VRV         Q++ +P  
Sbjct: 1347 QGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPAELAACYQLD-SPRY 1405

Query: 540  RLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVSQVGTYTFGIIVDRVF 599
                    L  L  LL+         G    A  G+     +++      +F I  D + 
Sbjct: 1406 VYAGHEYELRYLGELLQ---------GLPRPALLGQSVPLPVLLVHSKEQSFAIQADSLS 1456

Query: 600  DTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILD 635
             + EIVVK + P    V+  SG T+LGDG V++ILD
Sbjct: 1457 PSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILD 1492



 Score = 70.9 bits (172), Expect = 7e-16
 Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 19/253 (7%)

Query: 684  VPLALVARLEEIETDKIEHSFGKPVVQYRGQLMPLVGIHDEFTLAGEGRQPVLVFSDRDR 743
            VP A +A   ++++ +  ++  +  ++Y G+L  L G+     L      PVL+   +++
Sbjct: 1389 VPPAELAACYQLDSPRYVYAGHEYELRYLGEL--LQGLPRPALLGQSVPLPVLLVHSKEQ 1446

Query: 744  TMGLVVDEIV---DIVEDHLKVELRADLRGVVGTAVV-NGKATDIIDTGYYLTKAFGDWF 799
            +  +  D +    +IV   L  +  A + G+ G  ++ +G+   I+D    L +  G   
Sbjct: 1447 SFAIQADSLSPSREIVVKSLGPQFAA-VAGLSGATLLGDGRVVLILDL---LGQLRGQQR 1502

Query: 800  GTMKSDAFGEQKS--------AIRVLLVDDSPFFRNLLTPLLSVSGYAVTAVESAEKALE 851
               +    G Q+         A+ V++VDDS   R + + LL   G +V   +    A+ 
Sbjct: 1503 RLARLPGGGSQRQLLGPAPRRALLVMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDAMA 1562

Query: 852  LREKGHSFEAIISDIEMAGMDGFSFAAAIRADGRWGNLPLIALSSHATERDLQRGREAGF 911
            L E+ H  + ++ DIEM  MDGF  A  IR D R  +LP+I ++S   ++   R    G 
Sbjct: 1563 LLEE-HRPDVLLLDIEMPRMDGFEVATRIRRDARLKDLPIIMITSRTGQKHRDRAMAIGV 1621

Query: 912  DDYVAKFDRDSLL 924
            ++Y+ K  ++SLL
Sbjct: 1622 NEYLGKPYQESLL 1634



 Score = 50.1 bits (118), Expect = 1e-09
 Identities = 28/132 (21%), Positives = 59/132 (44%)

Query: 2   DDLLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFLGLPRLESL 61
           D+L   FL E  E +  ++   +    +   +  L  + R +HT+KG+   +    +  L
Sbjct: 439 DELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAEL 498

Query: 62  AHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEPEGDDKDLKAHLNA 121
           A   E++L +  +G   ++P  V  +      + ++L    A ++    + + L  HL++
Sbjct: 499 AWGAEHLLNRVLEGRSVLSPEGVVALQQVFVHLPDLLADFAAGQLPQLTEIEQLAGHLHS 558

Query: 122 FAEGKQPSVAAM 133
            AE   P+ A +
Sbjct: 559 LAENDAPAAAGV 570



 Score = 30.8 bits (68), Expect = 8e-04
 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 4   LLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFLGLPRLESLAH 63
           LL  F +E    +A+L+V L +     +D  +  ++ R +HT+KG+    G+  +  LA 
Sbjct: 577 LLGIFRSEAQGHLASLEVYLQST--GGHDTPVSDDLQRALHTLKGSAAMAGVMPVAELAT 634

Query: 64  AGENVLGKFRDGDLEVTPA 82
           A + +  +++   L +  A
Sbjct: 635 AFDRLAREYKGHQLPLQMA 653