Pairwise Alignments

Query, 942 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 767 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  221 bits (563), Expect = 1e-61
 Identities = 188/652 (28%), Positives = 294/652 (45%), Gaps = 57/652 (8%)

Query: 4   LLSEFLTETSESIATLDVELVNLERNPNDKGI--LSNIFRLVHTIKGTCGFLGLPRLESL 61
           LL  F  E  E +  +   L  LE      G+  L  IFR  H++KG    + LP +E +
Sbjct: 8   LLQAFQIEYREHVEAIRTLLDGLEHKAEGSGLAQLDEIFRRAHSLKGASRAVDLPAVEEI 67

Query: 62  AHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEPEGDDKDLKAHLNA 121
           +H  E +  K R G  ++       + H +D I++ +    ANE  P  D     + L+A
Sbjct: 68  SHRMETLFAKVRSGQAKLDHDMAIGLGHVLDVIEDWVAANLANEPLP--DTAATISALDA 125

Query: 122 FAEGKQ------PSVAAMAPAPARAAGSGPAISEGGY-PVAAELLAEVSEAVAKGKRAAT 174
             EG        P  A  AP PA    S P + +    P  AE      E      RAAT
Sbjct: 126 MIEGHAAPAVVAPPRAPPAPVPAPQLQSAPPVPQAPPDPPPAE-----PEDDEPADRAAT 180

Query: 175 EAELAAELAAELAAAEKAEQAVAAPVPEVIPEVKAATPVVQPAKPPAVTAAHDTNGPNGG 234
            A L  E    + A       +     E++ E      V Q     ++     + G    
Sbjct: 181 TAPLRPEETVRVRALHL--DRLLRSSNELLTETMNQRQVTQ-----SLLGLDRSLGDFDR 233

Query: 235 GGGEQKEGSVASQ----------SIRVNVELLENLMTLVSELVLTRNQLLQMVRGSDDSE 284
                ++ + A+           ++    E LE  +T +S       + L+ VR      
Sbjct: 234 SWRRARKNAAAALRDLGDYDRAIALERQYEALEQSLTGIS-------RELRSVRRRQQRT 286

Query: 285 FVAPLQRLSHITTDLQEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTEL 344
             A    L  +  DLQ+ V + RM P  + +    ++VRDL+  + K++ +Q+ G D E 
Sbjct: 287 GWA----LRQLGNDLQQEVRQVRMVPAESIFGAFRKMVRDLARAVGKQVTVQVSGLDVEA 342

Query: 345 DRQVLEMIKDPLTHMVRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDG 404
           DR VL+ +KDP+ H++RN+  HG+E PDER A GK     + L+     G +++ I DDG
Sbjct: 343 DRMVLQGLKDPVMHLLRNALSHGVEPPDERRAEGKSPAAHVSLSFDVSEGRLVVTIEDDG 402

Query: 405 RGLNLERIRAKALSNGLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVK 464
           RG+N E IR KA+  GL +EA+  ++  Q +   IF  G STA  V  +SGRG+G+ VV+
Sbjct: 403 RGVNFEAIRRKAVERGLFSEAQSFDVDRQSLIDVIFDPGFSTARVVDDLSGRGMGLSVVR 462

Query: 465 TNIEKIGGTVELKTWPGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTA 524
             +  + GTVE++     G+ F + +PLT++     +VE  G  + +P   V  L RV A
Sbjct: 463 EAMAMMNGTVEVQDRKPMGTCFRLSLPLTVSTQRLFLVECQGHVYGLPTEGVDRLYRVRA 522

Query: 525 NSETTIEQINTAPVLRLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVS 584
               T+E      V+ L DR +PL+SL+ LL L +           A    R+   +VV 
Sbjct: 523 EDVGTVE---GKSVVFLGDRQIPLLSLAHLLALGE----------SAVKVTRNVVPLVVL 569

Query: 585 QVGTYTFGIIVDRVFDTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILDP 636
           + G     + +D      E +VK +       +M +G  +L DG + ++L+P
Sbjct: 570 KNGERRVAVAIDGFLSIREGLVKDIGVPGARGTMVAGGVLLEDGDIALVLNP 621



 Score = 87.8 bits (216), Expect = 2e-21
 Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 21/264 (7%)

Query: 684 VPLALVARLEEIETDKIEHSFGKPVVQYRGQLMPLVGIHDEFTLAGEGRQ------PVLV 737
           +P   V RL  +  + +    GK VV    + +PL+ +     L     +      P++V
Sbjct: 509 LPTEGVDRLYRVRAEDVGTVEGKSVVFLGDRQIPLLSLAHLLALGESAVKVTRNVVPLVV 568

Query: 738 FSDRDRTMGLVVDEIVDIVEDHLKVELRADLRGVVGTAVVNGKATD-----IIDTGYYLT 792
             + +R + + +D  + I E  +K      + G  GT V  G   +     ++   + + 
Sbjct: 569 LKNGERRVAVAIDGFLSIREGLVK---DIGVPGARGTMVAGGVLLEDGDIALVLNPFEIV 625

Query: 793 KAFGDWFGTMKSDAFGEQKSAIRV---LLVDDSPFFRNLLTPLLSVSGYAVTAVESAEKA 849
           + F    G+++     E+ + ++V   L+VDDS   R L   +L   GY V       +A
Sbjct: 626 ETFRK-SGSIRVLTTVEKPAEVKVPVILVVDDSLTTRTLEKSILEAHGYQVRLAHDGLEA 684

Query: 850 LELREKGHSFEAIISDIEMAGMDGFSFAAAIRADGRWGNLPLIALSSHATERDLQRGREA 909
           L  R +G S + IISDI+M  +DGF    A+++D    ++PLI +SS     D +RG E 
Sbjct: 685 LG-RLRGESIDLIISDIQMPRLDGFGLLQAVKSDPALKSIPLILVSSLEAREDKERGLEL 743

Query: 910 GFDDYVA--KFDRDSLLEVLGQLV 931
           G D YV   KFD+  LLE +GQ +
Sbjct: 744 GADAYVVKRKFDQKELLETIGQFL 767