Pairwise Alignments

Query, 290 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 4e-16
 Identities = 69/273 (25%), Positives = 111/273 (40%), Gaps = 43/273 (15%)

Query: 26  LFLLAPTAFLVIGAFQNQEGGFTLDNL--FNLA--NPTIVAAYWI-----SIKVSAASAI 76
           LFL+ P   +V  +F +  G F +  L  F+L        +A W+     SI V+ A+ +
Sbjct: 26  LFLILPVLVIVPLSFNS--GSFLVYPLQGFSLQWYQDFFGSAEWMRALKNSIIVAPAATV 83

Query: 77  GGAVIGLLIAQAAVNGGLPGWIRPTLFTFSGVASNFAGIPLA-FAFLATLGRTGLVTALL 135
              V G L A     G  PG         S +      I +A + F A LG     T+L+
Sbjct: 84  LAMVFGTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFFAPLGMGNSFTSLI 143

Query: 136 KSWFGVNLYASGFNLLGFWGLTLTYLYFQIPLMVLIISPALEGLRREWREAAATLGAGDI 195
                                 L +    +P +++ +S  L+G       AAA+LGA  +
Sbjct: 144 ----------------------LVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPL 181

Query: 196 EYWRRIALPILWPSVLGATLLLFANAFGAIATAYALTGSSLNIVTILLYAQIRGDVLHDK 255
             +RR+ LP++ P V+   L  FA +F  +     L G     +   +++ IR      +
Sbjct: 182 LAFRRVTLPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIR------E 235

Query: 256 NLGYALALGMIFITGLSNVLYI---WLRGRGER 285
           NL   +A     +   S +L +   WLRGR E+
Sbjct: 236 NLSPTIAAAATLLIAFSVLLLLTLEWLRGRSEK 268