Pairwise Alignments

Query, 366 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 329 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  288 bits (736), Expect = 2e-82
 Identities = 158/349 (45%), Positives = 219/349 (62%), Gaps = 21/349 (6%)

Query: 14  MAYLDLKDLHKAFGAARVVSDFTLAVERGEFVSFLGPSGCGKTTVLRMIGGFETPSSGRI 73
           M+++ +++L K++ +  V SD   ++ +GEFV+ LGPSGCGK+T+LR I G    +SGRI
Sbjct: 1   MSFVSIENLQKSYASTSVFSDINCSIAKGEFVTLLGPSGCGKSTLLRCIAGLTPVNSGRI 60

Query: 74  LIDGQDVTALTPARRKVGMVFQAYALFPNLTVAENVAFGLKVAREPASQTARRVDEMLEL 133
           L+DG D+  LTP +R +GMVFQ+YALFPN+TV +NVAFGL++ +  A ++ RRV E+L +
Sbjct: 61  LLDGSDLVPLTPQKRNIGMVFQSYALFPNMTVEQNVAFGLRIQKVSADESTRRVAEILRM 120

Query: 134 IKLPQLKDRYPYQLSGGQQQRVALARALAVRPKILLLDEPLSALDAKIRVSLREEIRAVQ 193
           ++L     RYP+QLSGGQ QRVALAR+L  RP++LLLDEPLSALDA+IR +LRE+IRA+Q
Sbjct: 121 VELHDFATRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKNLREQIRAIQ 180

Query: 194 RELGITTVFVTHDQEEALSMSDRVVVMHNGRADQVGAPFEIYNAPKTRFVASFVGTLNLL 253
           RELG+TT+FVTHDQEEAL+MSDR+ +M+ GR  Q G    +Y AP   F A F+G  NLL
Sbjct: 181 RELGLTTIFVTHDQEEALTMSDRIFLMNQGRIVQSGDAETLYTAPVDVFAAGFIGNYNLL 240

Query: 254 EGVALAPDRLTIEGQGITTTRGLAGAAVGATVSLALRPEAIGPLPTPERTNKLEATVVDV 313
           E    A D   +  + I +              +A+RPE+I        T +LE  +   
Sbjct: 241 E----ADDATRLMQRPINS-------------RVAIRPESI----QLSLTGELEGEIRSH 279

Query: 314 GFQGALVRVKVAVGRQSLTYVTFNAPNSPPPERGTALTLWFGPDDVLVL 362
              G ++R +V      L     N         G  +TL   P  +  L
Sbjct: 280 SLLGNVIRYRVQARGVKLVVDVLNRSADDLHPDGRRVTLNIEPSALCAL 328