Pairwise Alignments

Query, 314 a.a., Periplasmic binding protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 292 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 26/238 (10%)

Query: 9   LRRLLGGAAVIAALLGPPAALAADPPPRRVVSINLCTDQLALLLAAPGQVRSVSPLAAKP 68
           +R      A++  LL  P A A++ P +R VS      +  + L    ++  V   +  P
Sbjct: 1   MRLSASAIALVVGLLVNPGAQASELP-QRWVSAGGALSEWVMALGGESKLVGVDTTSQHP 59

Query: 69  ELSMLADRARAIPA----NHGAAEEIFLMAPDLVLAGS--FGAGNAVTMLRGLGMAVEVF 122
                 D  +A+P+       +AE I  + P  VL G+   G    +  +R  G+ VE+F
Sbjct: 60  ------DALKALPSIGYQRQLSAEGILSLRPQ-VLVGTEEMGPPPVLAQIRSAGVQVEMF 112

Query: 123 PPATSFDDIRKDLRRMGKLLGRSARAEALIGAFDRHLAE----ITKALSPARPRAAVI-- 176
                   ++ +L+ +GKLLG  A+A  L   +++ L +    +  A S  +    ++  
Sbjct: 113 SAQPDLPTLKGNLQHLGKLLGTDAKANELFTGYEQALDQQKRWVANAQSTQKAPGVLLLL 172

Query: 177 -EANGYTF--GSGTLLDEAVRAAGLDNLATRLGHSGMIALSLEALVMADPQMVVTGRR 231
             A G     G  T  D  ++ AG  NLAT   H+G    S+E+L    P ++V   R
Sbjct: 173 GHAGGKPLIAGKDTAADWMLQQAGGRNLAT---HTGYKPFSVESLAGLSPDVLVFADR 227