Pairwise Alignments

Query, 340 a.a., OmpA family protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 344 a.a., Outer membrane porin F from Pseudomonas putida KT2440

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 93/353 (26%), Positives = 126/353 (35%), Gaps = 73/353 (20%)

Query: 23  AQTPEGAYVALHGGVNFNVDQELSIPGAKGDAKTDTGYAAGGAAGYAFGGGPRLELEGTW 82
           A T  GA     G V   +  +     ++ D K D G   GG+ GY       L L    
Sbjct: 16  AATSIGAMAQGQGAVETEIFYKKEFFDSQRDFKND-GNLFGGSIGYFLTDDVELRLGYDE 74

Query: 83  RSNDLYKIGNLGTKGNLDSASLMVNAIYDIPTGTD-FYPYLGVGAGASWVFAEAK----- 136
             N   + G      N+  ++  ++A+Y      D   PY+  G     +    +     
Sbjct: 75  VHNARGEDGK-----NIKGSNTALDAVYHFNNPYDAIRPYVSAGFSHQSLGQTGRGGRDH 129

Query: 137 ----NSGAGFKAYDDDIAFAYQGIAGVGYNVDQNIGVTLDYRFLGTTGLDFKTSAGKADY 192
               N GAG K Y  D+ +A  G+    YN+DQ                           
Sbjct: 130 STFANVGAGAKWYITDMFYARAGVEAQ-YNIDQG-------------------------- 162

Query: 193 DAYYNHTVLVGLRYSFSKPSAPPPPAPVQEVVQQS------------------------- 227
           D  +  +V VGL +  S   A   PAPV EV   S                         
Sbjct: 163 DTEWAPSVGVGLNFGGSPKQAEAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADG 222

Query: 228 ---VVEVPESYL-VFFDFDSTSITPEAGGIINTAATNAKSTGSSTIEVTGHADRSGGDAY 283
              V EV    L V FDFD + + P + G I   A   K    +T  V GH D  G DAY
Sbjct: 223 CPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAY 282

Query: 284 NLALSKRRAEAVVGEL-ERNGISRSQIAVYAKGEADPLVPTPDGVREPQNRRV 335
           N  LS+RRA AV   L ++ G+  S++     GE  P+           NRRV
Sbjct: 283 NQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAVNRRV 335