Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

 Score =  404 bits (1037), Expect = e-117
 Identities = 221/429 (51%), Positives = 284/429 (66%), Gaps = 6/429 (1%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAE---EAPAEALPKGQTGGRGGQRLSF 57
           MAK    + C  CGA +P+W G+C  CG WN++ E   E+   A P     G  GQ+   
Sbjct: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQAQI 60

Query: 58  VSLEGVGAPP-PRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARGG 116
            +L  V     PR  T   ELDRV GGGLV GS +LIGGDPGIGKST+LLQ +  +A G 
Sbjct: 61  KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAVG- 119

Query: 117 ARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQT 176
             ++Y++GEE+  QV +R+ RLGL +  + +   T +  I+AT    E P V+VIDSIQT
Sbjct: 120 MPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARV-EKPRVMVIDSIQT 178

Query: 177 MYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAVI 236
           ++ + L SAPG VAQVR  +  L+R AK+ G  +FLVGHVTKEG +AGPRV+EHMVD V+
Sbjct: 179 IFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVL 238

Query: 237 YFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCVF 296
           YFEGE     R+LRAVKNRFGA +E+GVF M+D GL EV NPSA+FL   +  V GS V 
Sbjct: 239 YFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVM 298

Query: 297 AGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYLN 356
           A  EGTRPMLVE+QALV  S   + RR  +G D  RLAM++AVL    G+     DV+LN
Sbjct: 299 ATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLN 358

Query: 357 VAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAAK 416
           V GG+++ E A+DLA+ AA++SS    P+   ++VFGEIGLSGE+R V  G  RLKEAAK
Sbjct: 359 VVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAK 418

Query: 417 LGFDQALMP 425
            GF +A++P
Sbjct: 419 HGFKRAIVP 427