Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 458 a.a., DNA repair protein RadA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  415 bits (1067), Expect = e-120
 Identities = 225/460 (48%), Positives = 294/460 (63%), Gaps = 10/460 (2%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKGQTGGRGGQRLSFVSL 60
           MAK   +++C  CG   P+W+G+C  C  WN++ E       P         +     +L
Sbjct: 1   MAKEKTQYICSECGGASPKWLGKCPHCNAWNTLVESVAESTAPAKNRFAALAKTAEVTTL 60

Query: 61  EGVGAPP-PRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARGGARS 119
             + A    R  TG  ELDRV GGG+V G  +LIGGDPGIGKSTLLLQA+  L R G ++
Sbjct: 61  ADIEATDVQRTPTGHDELDRVLGGGVVEGGVVLIGGDPGIGKSTLLLQALDSLQRSGQKT 120

Query: 120 VYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQTMYL 179
           +Y++GEE+  QV LR+ RLGL+ + V + A   +  I+ATL+S  P  + VIDSIQT+Y 
Sbjct: 121 LYVTGEESGAQVALRSRRLGLDGSQVSVLAEIQLEKILATLESTRPA-IAVIDSIQTVYS 179

Query: 180 DTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAVIYFE 239
           + L SAPG+VAQVR  +  L R AK  G  + LVGHVTKEG +AGPRV+EHMVD V+YFE
Sbjct: 180 EQLTSAPGSVAQVRECAAHLTRAAKASGTAIVLVGHVTKEGALAGPRVLEHMVDTVLYFE 239

Query: 240 GERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCVFAGM 299
           G+    FR++RA+KNRFGA +EIGVF M++ GL  V NPSA+FL++    V GSCV   +
Sbjct: 240 GDTHSSFRLIRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHSEPVPGSCVMVTL 299

Query: 300 EGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYLNVAG 359
           EGTRPMLVEIQALV    P S RR  VG D  RLAM++AVL    G+A    DV++N  G
Sbjct: 300 EGTRPMLVEIQALVDSGGP-SPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFVNAVG 358

Query: 360 GLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAAKLGF 419
           G+RI EPAADLAV  ++ SS  G P+P   + FGE+GL+GE+R    G  RLKEAAKLGF
Sbjct: 359 GVRINEPAADLAVMLSITSSLRGKPLPKGFLAFGEVGLAGEVRPAPRGQDRLKEAAKLGF 418

Query: 420 DQALMPAR--PRDSGKRGGPGVKEGLRMREIGHLQDLVAL 457
             A++P    PR + K       EGL +  +  +++ + L
Sbjct: 419 SVAVVPKANLPRKNDK-----AFEGLTVHGVDRIEEAMEL 453