Pairwise Alignments

Query, 414 a.a., Major facilitator superfamily transporter MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 509 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score =  117 bits (294), Expect = 6e-31
 Identities = 88/283 (31%), Positives = 131/283 (46%), Gaps = 25/283 (8%)

Query: 6   SSVPVAANR----GVTTTLALSMLLAALGTSIANIALPRLAEAFSAPFHHVQGVVIAYLG 61
           S +P AA+      +   + L   +A L  SI N+ALP L  A S     +Q V+  Y  
Sbjct: 3   SHIPAAADPRRRLALVAAVYLGSFIATLDVSIVNVALPTLQRALSTDLAGLQWVIDIYAL 62

Query: 62  TLTVSVLIVGRLGDLHGLRRMHLVGLGLFAVASLLCALAPTLWLLIGARALQGLGAAFLM 121
            L+  +L  G LGD +G +R  L G+ +F + S +CALA  L  L+  RA+QG+  A L+
Sbjct: 63  CLSAFMLSAGPLGDSYGRKRAWLAGVIVFTLGSAMCALAGNLPTLLAGRAVQGVAGALLI 122

Query: 122 SLSMALMRET-TSPERMGRAMGLLGTMSALGTALGPSLGGALLSASGWRGIFLVQCPLAV 180
             +++L+      P    R +G   + +AL   LGP LGG L+  +GW+ IFL+  P+ V
Sbjct: 123 PGALSLLAHAFPEPASRARVIGGWSSFTALSLILGPMLGGLLVDHAGWQSIFLINLPIGV 182

Query: 181 LALILAFVSLPSPAGKESGPPTRVRAMVKVAMLPALLINLLVAAVMMTTLVVGPFYLGRG 240
           L + L    +   A  E      V  ++ V  L AL   L+VA                 
Sbjct: 183 LTVGLGLWGIRETAHPEHAALDPVGQVLSVLWLGALTYGLIVA----------------- 225

Query: 241 LGLAETAVGLVMAVGPALAIVSGLPSGRLVDAWGARRVVGIGL 283
               E   G V A    +A   GL    +V+A  AR ++ +GL
Sbjct: 226 ---GEHGWGSVQAASALVAAAVGLVLFLVVEARVARPLLPLGL 265



 Score = 24.3 bits (51), Expect = 0.009
 Identities = 56/221 (25%), Positives = 82/221 (37%), Gaps = 36/221 (16%)

Query: 201 PTRVRAMVKVAMLPALLINLLVAAVMMTTLVVGPFYLGRGLGLAETAVGLVMAVGPALAI 260
           PT  RA+         +I++    +    L  GP     G   A  A  +V  +G A+  
Sbjct: 40  PTLQRALSTDLAGLQWVIDIYALCLSAFMLSAGPLGDSYGRKRAWLAGVIVFTLGSAMCA 99

Query: 261 VSGLPSGRLVDAWGARRVVGIGLAMLAAGAFLLSVLPNSL-----------GVGGYVLAI 309
           ++G     L      R V G+  A+L  GA  LS+L ++            G   +    
Sbjct: 100 LAG----NLPTLLAGRAVQGVAGALLIPGA--LSLLAHAFPEPASRARVIGGWSSFTALS 153

Query: 310 LVLTP---GYQLFQAANNTATLADSPKEGRGVVSGLLGLSRN----------IGLIL--- 353
           L+L P   G  +  A   +  L + P     V  GL G+             +G +L   
Sbjct: 154 LILGPMLGGLLVDHAGWQSIFLINLPIGVLTVGLGLWGIRETAHPEHAALDPVGQVLSVL 213

Query: 354 --GASVMGALFAFAVGSEDVGRASAL-AIAKGMQLTFLVAA 391
             GA   G + A   G   V  ASAL A A G+ L  +V A
Sbjct: 214 WLGALTYGLIVAGEHGWGSVQAASALVAAAVGLVLFLVVEA 254