Pairwise Alignments

Query, 599 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

Subject, 569 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 432 GVAYERTDRWPLAEQDFQTALRLNPDQPFVLNYLGYSWLDNGINVDQAKQLIERAVAQRP 491
           G +Y     +  ++  ++  L  +PD   VLN   Y        +D+AKQ+ ER V   P
Sbjct: 427 GDSYNSLKDYKKSDAAYEEVLAQDPDNEHVLNNYSYFLSLRNEKLDRAKQMSERLVKLHP 486

Query: 492 KDGYIIDSLGWAHFRLGEYAEAVGILERAIHETPDDATINDHLGDAYWMVGRRLEARYQW 551
            +   +D+  W  +++G Y +A   LE+A+    DDAT+ +H GD  + +G++ EA  QW
Sbjct: 487 TNPTYLDTYAWVLYKMGNYTDARKYLEQAV-AISDDATVVEHYGDVLFKLGKKEEAVSQW 545

Query: 552 ERALSLADDADLSASIQKKL 571
           ++A  L  +A  SA I KK+
Sbjct: 546 QKA-KLKGEA--SAYIDKKI 562



 Score = 35.4 bits (80), Expect = 7e-06
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 7/147 (4%)

Query: 391 IEKGDLLRQDQRFAEAATAYSAAIARMGAPDPRHWAVYFGRGVAYERTDRWPLAEQDFQT 450
           ++ GD     + + ++  AY   +A+   PD  H    +   ++  R ++   A+Q  + 
Sbjct: 424 LQLGDSYNSLKDYKKSDAAYEEVLAQ--DPDNEHVLNNYSYFLSL-RNEKLDRAKQMSER 480

Query: 451 ALRLNPDQPFVLNYLGYSWLDNGI-NVDQAKQLIERAVAQRPKDGYIIDSLGWAHFRLGE 509
            ++L+P  P  L+   Y+W+   + N   A++ +E+AVA    D  +++  G   F+LG+
Sbjct: 481 LVKLHPTNPTYLDT--YAWVLYKMGNYTDARKYLEQAVAISD-DATVVEHYGDVLFKLGK 537

Query: 510 YAEAVGILERAIHETPDDATINDHLGD 536
             EAV   ++A  +    A I+  + D
Sbjct: 538 KEEAVSQWQKAKLKGEASAYIDKKIKD 564



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 60/284 (21%), Positives = 110/284 (38%), Gaps = 20/284 (7%)

Query: 323 LLLGQLLAGQNRHDDAIAAY----RGIESHDTLMLAAGLAEAESLRAQGKIDDAVVEFDK 378
           LLL QL + Q ++D A  A+    R +   D  +       A+   +Q + D+A+  +++
Sbjct: 110 LLLAQLHSEQKQYDAAAQAFNDLIRNVPGSDEYLFNL----ADLYLSQSQYDNALRTYER 165

Query: 379 LAAHFPSRPDPLIEKGDLLRQDQRFAEAATAYSAAIARMGAPDPRHWAVYFGRGVAYERT 438
           +   F       + +  +  + Q+  + A A    + +    +P   + +  +   Y  +
Sbjct: 166 IEKEFGDMEQLHVNRQQIYLR-QKNVDKAIAEGEKLLKS---NPTEISYFLSQAELYNAS 221

Query: 439 DRWPLAEQDFQTALRLNPDQPFVLNYLGYSWLDNGINVDQAKQLIERAVAQRPKD----- 493
            R   A      ALRL P  PF    L       G + +  KQ ++ A A    D     
Sbjct: 222 QRPDEAISTLNRALRLEPGNPFAHLMLSDLNRQKGQHTESEKQ-VKLAFASPELDIDTKV 280

Query: 494 GYIIDSLGWAHFRLGEYAEAVGILERAIHETPDDATINDHLGDAYWMVGRRLEARYQWER 553
             ++D +        E   A+ +++  I   P++A       D   +VG++  AR  + +
Sbjct: 281 RILVDFIRQLPNPQIE-GVALELVDLTIATHPEEAKAYAVAADLQTIVGKKEIARNNYLK 339

Query: 554 ALSLADDADLSASIQKKLDTGLSPPSPVVPRSAGRPAERQPTSA 597
           A+ L D           LD  L  P  +V + A +  E  P  A
Sbjct: 340 AVKLDDSHFKIWQQIVLLDAELEQPDEMV-KHAEQALELFPNQA 382