Pairwise Alignments

Query, 599 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

Subject, 249 a.a., type IV pilus biogenesis/stability protein PilW from Serratia liquefaciens MT49

 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 16/142 (11%)

Query: 391 IEKGDLLRQDQRFAEAATAYSAAIARMGAPDPRHWAVYFGRGVAYERTDRWPLAEQDFQT 450
           +++GDL    Q   +AA A            P+ +    G  +  +R      AEQ +Q 
Sbjct: 44  LKQGDLNAARQNLEKAADAA-----------PQDYRTQLGMALYEQRIGENSAAEQRYQQ 92

Query: 451 ALRLNPDQPFVLNYLGYSWLDNGINVDQAKQLIERAVAQRPKDGYIIDSL---GWAHFRL 507
           AL+L P+   VLN  G      G  V   +Q    AVA  P  G + DSL   G+   + 
Sbjct: 93  ALKLAPNNGTVLNNYGAFLCSLGQYVPAQQQFSAAAVA--PDYGQVADSLENAGYCFLKA 150

Query: 508 GEYAEAVGILERAIHETPDDAT 529
           G+  EA  +L RA+   PD  T
Sbjct: 151 GQNDEARILLTRALKIDPDKGT 172