Pairwise Alignments

Query, 576 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

Subject, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  271 bits (693), Expect = 5e-77
 Identities = 171/469 (36%), Positives = 258/469 (55%), Gaps = 7/469 (1%)

Query: 101 LSKLPLGFFTFQRTGALTTTVAENVKMVEEMFTKVVNEIVAGFTLPLFIGILLVVIDWRM 160
           +++LPLG+FT   T  L   + +    V ++   V+  +++    PL + + L ++   +
Sbjct: 96  VAQLPLGWFTPDNTARLGHVITQGTMAVAQLPAHVLTPLISSSVTPLVLLVALFILHPPL 155

Query: 161 GLAAVASVPLAFAVLRLTQGRFMRLSAKRVDVH-AEVSGRLLEYIDGLRVIRGYGLAGAK 219
           GL A+ ++P   AVL L   R  R +      H A  S R++E+     V+R +   G  
Sbjct: 156 GLVALLALPALAAVL-LFSARLGRRADHAFHQHFAAASQRMVEFAQAQSVLRAFNGEGGG 214

Query: 220 FASLRDSLDTQRRVSVALEIQGGLGIMAMAVVLEMGFIALLMVGAF----AMLGGALSPA 275
              L  SL+ QR   + L I+  L  +  +  ++  F ALL+           G A    
Sbjct: 215 TRLLAQSLERQRSSGMGLIIRASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAV 274

Query: 276 SYLMAMVLAQKFYAPITRSLMLLVDIKYLSLALKRVQTLLNAPRLPEPVEPKVPSNNAIV 335
           + ++A+VL  +F  P+      +  ++     L+ ++ +L A  LPEP  P  P   AI 
Sbjct: 275 AVIVALVLVCRFIDPLQDVASHVEILRGAHGQLQEIERILAAKPLPEPASPHRPVGGAIN 334

Query: 336 FDAVSFRYDEAGDEPALSEVTFTLREGTTTALVGPSGAGKSTVAHLIARFHDVTSGAVRI 395
              VS RY+  G +  L  V   +  G+ TA++G SG+GK+++  LIARF D T G+VRI
Sbjct: 335 LQGVSLRYNPTGPD-VLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRI 393

Query: 396 GGVDLRDMASDELMRRVSMVLQDVHLFDDTVANNIRIGRSDASDEDVVAAARHAQCHAFI 455
           GGVD+R MA   L   VS VLQD  LF  ++A+NIRIG+ DASD +V+ AA  A     +
Sbjct: 394 GGVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTL 453

Query: 456 EALPQGYQAPIGEGGAWLSGGQKQRLSIARALLKDAPIVLLDESTASLDPECEAAFHQAF 515
           E L  G    +GEGGA LSGG++QR++IARAL++ AP++L+DE+TA+LD E +A   Q  
Sbjct: 454 ERLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTL 513

Query: 516 KILAAGKTVLVIAHRLHTVVNADQIVVMERGRVVQTGTHGDLIASPGLY 564
             L    T++VIAH+L TV  AD IVV++ G+VV+ GT   L A+ G Y
Sbjct: 514 HSLHGRCTLVVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHY 562