Pairwise Alignments

Query, 202 a.a., Transcriptional Regulator, TetR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 210 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 8/204 (3%)

Query: 2   SSPAPPRGPGRPREFDLDVALDGAIVAFCERGFHANSITQLSEAMGVGTGSLYKAFPDKR 61
           S+    +  GRP+ FD D ALD A+  F + G+ A S+  L EA G    +LY  F +K 
Sbjct: 5   STQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKE 64

Query: 62  GLFLAAVERYAALRGAQLDAVLDTVEGGRERLRAALTFYAATPH---DGDDRQGCLLVNA 118
           GLF A ++RY     A+ +A L   E   E   A   ++AA  +     D   GC ++N 
Sbjct: 65  GLFRAVLDRYIDRFAAKHEAQLFCEEKSVE--SALADYFAAIANCFTSKDTPAGCFMINN 122

Query: 119 ATESATFDTALANRIRDCLSLTESRLAGLIAEGQSDGSIDQTIDGPATARLMLCLIHGLR 178
            T  +     +AN ++   ++ E  L   + + Q+ G I    D    A  + C+I G+ 
Sbjct: 123 CTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMS 182

Query: 179 VVGQAGMPPIGVAALVDAAMRTLR 202
           +  + G     +  L+  A  TLR
Sbjct: 183 ISAREG---ASLEKLMQIAGTTLR 203