Pairwise Alignments

Query, 372 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 359 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  324 bits (830), Expect = 3e-93
 Identities = 174/330 (52%), Positives = 228/330 (69%), Gaps = 15/330 (4%)

Query: 1   MASLGIRGITKRFGATEVLKGIDLDLDDGEFLVLVGPSGCGKSTLLNIIAGLETPSEGEV 60
           MAS+ +R + K +GA +V+KG+DLD+  GEF V VGPSGCGKSTLL +I+GLE  S G++
Sbjct: 1   MASIQLRQVKKTYGALDVIKGVDLDIKHGEFCVFVGPSGCGKSTLLRMISGLEELSGGDI 60

Query: 61  VIGGAVVNDVAPRDRDIAMVFQSYALYPTMTVRENITFGLRMRGVAKPERERAVAKVATM 120
           VIGG VVN V   DR +AMVFQSYALYP MTVREN++FGL   G  K +    V +VA M
Sbjct: 61  VIGGDVVNTVPAADRGLAMVFQSYALYPHMTVRENLSFGLENIGTPKKDIAEKVTQVAKM 120

Query: 121 LQIGPLLDRKPGQLSGGQRQRVAMGRALVRDPQIFLFDEPLSNLDAKLRVEMRHEIKTLH 180
           LQI  LL+R+P  LSGGQRQRVA+GRA+VR+P++FLFDEPLSNLDA+LRV+MR EI  LH
Sbjct: 121 LQIDQLLERRPKDLSGGQRQRVAIGRAVVREPRVFLFDEPLSNLDAELRVDMRGEISNLH 180

Query: 181 RAVARTMVYVTHDQVEAMTLASRIAVMHQGVIQHYGTPAEIYERPANLFVAGFMGAQSMN 240
           R +  TM+YVTHDQVEAMT+A +IAV+  G ++ +G P ++Y RPAN+FVAGF+G+  MN
Sbjct: 181 RRLGNTMIYVTHDQVEAMTMADKIAVLRAGKLEQFGVPLDLYNRPANIFVAGFIGSPKMN 240

Query: 241 FAKGLLVGDSQGGGMAVRLDEAKGPLDLPLARPGNGWRSHLGRPVILGLRPEYIGAADPA 300
           F  G +  D+        L  A G L +PL + G  ++S  G+ V LG+RP ++ A    
Sbjct: 241 FFAGEVTSDA-----TPSLKIATGEL-IPLPQTGFAYKS--GQKVTLGIRPNHVQAG--- 289

Query: 301 GLPPGLVAVERRVDMIEPTGADTMVFFQLG 330
               G  A+   V   E  G ++ ++  LG
Sbjct: 290 ----GEGALTMSVRTAEQLGGESYLYGTLG 315