Pairwise Alignments

Query, 312 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 278 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  102 bits (255), Expect = 8e-27
 Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 12/277 (4%)

Query: 36  RIGLYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVG 95
           RIGL+ V ++     +L    M+  S+K   D  A   I +P    +  ++K ++     
Sbjct: 13  RIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWSNYVKVFEENSFF 72

Query: 96  VQCAGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQV 155
           +       YF NS+L+   A  ++ V+G   GY + + +   S ++   ++     P   
Sbjct: 73  L-------YFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAVV---IMIARMTPGLS 122

Query: 156 VLLPMARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFF 215
            L+P+  +     L G++   I++H+V  +         ++ T P EL  AA+IDGA  +
Sbjct: 123 FLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSW 182

Query: 216 RIFFSILLPMSPPIIVVTIIWQFTQIYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKE 275
           ++F  + LP++ P IVV+ I      +N+F+FG+       + + VA+ N++  S     
Sbjct: 183 QVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNML--SFEQVS 240

Query: 276 YNVDMAAAILTALPTLVVYAVAGKYFIRGLSAGAVKG 312
           +    AAA++  LP L++   A K  + GL+AGAVKG
Sbjct: 241 WGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVKG 277