Pairwise Alignments

Query, 1066 a.a., Helicase-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 982 a.a., ATP-dependent DNA helicase from Sphingobium sp. HT1-2

 Score =  618 bits (1594), Expect = 0.0
 Identities = 382/884 (43%), Positives = 499/884 (56%), Gaps = 38/884 (4%)

Query: 10  ITAVLGPTNTGKTHLAMERMLGHASGMIGFPLRLLARENYDKAVRRVGASRVALVTGEEK 69
           +TAVLGPTNTGKTHLA+ERM GH+SGM+GFPLRLLARE YD+ V   GA +VAL+TGEEK
Sbjct: 9   VTAVLGPTNTGKTHLAVERMCGHSSGMMGFPLRLLAREVYDRVVAIKGAQQVALITGEEK 68

Query: 70  ILPPRPSYFICTVESMPIDRRVD------------FLAIDEIQLCGDPERGHLFTERLLN 117
           I+PP   YF+CT ESMPI    +            F+A+DE QL  DPERGH+FT+R+L 
Sbjct: 69  IVPPGARYFLCTAESMPISGGREAAAMTGGLSDFAFVALDEAQLGADPERGHIFTDRILR 128

Query: 118 ARGREETMFLGAETMAPLIRKLVPGCQFDTRPRFSQLTYNGHRKLTRLPPRSAVVAFSAD 177
           ARGREETM LG+ ++A  ++ LVP  +   RPRFS L+Y G +KL+RLP RSA+VAFSA+
Sbjct: 129 ARGREETMILGSASIAKTVKSLVPEVEIIGRPRFSTLSYAGAKKLSRLPRRSAIVAFSAE 188

Query: 178 DVYAIAELVRRQRGGAAVVMGALSPRTRNAQVALYQSGEVDYLVATDAIGMGLNMDVDHV 237
           +VYA+AE++RR RGGAAVVMGALSPRTRNAQV ++ +G+VDYLVATDAIGMGLN+DV HV
Sbjct: 189 EVYAVAEMLRRFRGGAAVVMGALSPRTRNAQVQMFLNGDVDYLVATDAIGMGLNLDVAHV 248

Query: 238 AFAALSKFDGQGQRGLSAQEVAQIAGRAGRHMNDGTFGVTGDA---GPIAEDTVARVETH 294
           AFA+L KFDG+  R L+  E+AQIAGRAGRH  DGTFG  G          + +  +E H
Sbjct: 249 AFASLRKFDGRRSRRLTVAEMAQIAGRAGRHHKDGTFGSLGSEDGDAAFTPEEIEAIEAH 308

Query: 295 AFAPLRQIFWRN--PRLDFRSVEALLKSLGAAPPDEGLMRPRRAEDQQALEILAQDPEIA 352
            F  + Q+FWR+  PR D  S++ L+  L A P    L    +A D   L  +A+DPE+ 
Sbjct: 309 RFPSVDQLFWRDGAPRTD--SIDHLIIDLEARPDRPELRAAPQAVDLAVLRRMAEDPEVQ 366

Query: 353 QAAVGPQKVGLLWDVCRIPDFRKLRAETHVRLLGQIFRHLTAGN-----RRLPDDFVAGH 407
                 + V  LW  C +PDF+KL AE H R + +I+R + AGN       +P D+ A  
Sbjct: 367 ARVRSKRDVERLWAACGLPDFQKLGAEHHARTVARIWRFI-AGNGSGFGGHIPRDWFAQQ 425

Query: 408 AKRMDRNDGDIHALVDRIAGIRVWTYVSHQGDWLGDPGYWQEATRAIEDRLSDALHEKLT 467
             R+D   GDI  L  RIA  R W+Y++H+ DWL +P    E TR +E++LSDALH  LT
Sbjct: 426 IARLDSVQGDIDTLSGRIAAARTWSYIAHRPDWLANPVEMAERTRMLEEKLSDALHAALT 485

Query: 468 QRFVDRRTATLMRRLGERAMLDADVAATDGRVNVEGHDVGRLEGLTFHAEATGGREGDKA 527
           QRFVDRRT+ L+R +G+ A         DG V V+G  +GRL+G  F  +     +  K 
Sbjct: 486 QRFVDRRTSVLLRDIGQNASNLPVTVDPDGTVCVDGETIGRLDGFRFSVDPATRLQDRKL 545

Query: 528 VLNAAQKALRREIGERVQRLAADDDPVFSL-DPAGQ---LLWRGAPVARLEKGPEVLRPL 583
           +L AA++ L + +  +   L +  D  F+L D AGQ   + W+G PVA L  G  +L P 
Sbjct: 546 LLAAAERRLGKVLRVKADELMSAADTDFALMDDAGQTPGIAWQGTPVATLMAGAGLLAPE 605

Query: 584 VTLP-AESLLDAAQAEAVKTRLEAWVKHHLGTRLKPLFALDLAPLKGAARGLAFQLAENL 642
           + L  A + L     + V TRL  W +      L PL  +  +    A   +   +   L
Sbjct: 606 IRLDRALAALGPDVQKQVTTRLATWFEAQKQKHLLPLVKMSESAADPAVPAVVRAVFAQL 665

Query: 643 GTLSRSAANEHVDGQVRALSEADRKALARAGVRLGVECLFMPDLLKPDPQRLLAVLWRID 702
                 A    +D  +  L +  R  L RAG+ +GV  L+ P LLKP   R  A L    
Sbjct: 666 ADAGGVAPRLDLDSALGHLDKDQRHLLRRAGIDIGVLDLYHPGLLKPGAARWRAALQAAR 725

Query: 703 AGRHGGDVPADGRVSFPVDKRVPHAFYHAIGYRVVGDTAVRVDMIERFAADVRRLVRDAL 762
            G+    +P  G    P  ++         G+R  G   +R+DM ER A      +    
Sbjct: 726 IGKPCLPLPQPGLTLIPTGEKPQEMGARIAGFRSFGPQMLRIDMAERMARTAHETIAKNE 785

Query: 763 PAKG-KPADVSATPAEAAPETAADSAGAGGDAATPTPVVDATTPTSVVDATTPTSVV--- 818
           P     P  VS   +E A      +AG       PTP   A  P     A   T VV   
Sbjct: 786 PFSALSPQIVSLGLSEEAFLQLMRAAGFRPIDPVPTPAPVAEAPAEAAPAVEGTDVVEAT 845

Query: 819 DAAPETPGNAPIDTPAVAVAAVEGPSTEASAE-PTEAPEAAAEA 861
           +AAPE    A  + P   V A EG   EA+ E P EAP AA  A
Sbjct: 846 EAAPEATAEAVAEAP---VEADEGTPGEAATETPAEAPVAATGA 886