Pairwise Alignments

Query, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

Subject, 432 a.a., HlyD family type I secretion periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  277 bits (709), Expect = 5e-79
 Identities = 146/426 (34%), Positives = 241/426 (56%), Gaps = 1/426 (0%)

Query: 67  DSRQTIRAGWLIILVAFGGLGLWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIKEIL 126
           D  + +R GW ++L  FGG  LWA  APL   V   G +VV  NRK +QH++GGI+  I 
Sbjct: 8   DEERALRLGWWLVLAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQGGIVDRIQ 67

Query: 127 VKEGDRVHQGDPLIRLETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPDLIA 186
            KEGDRV  G  L+ L    A  ++  + +Q++   A EARL+AE+  Q ++   P L  
Sbjct: 68  AKEGDRVAAGQVLLTLNAVDARTTSEGLGSQYDQLIAREARLLAEQRNQSSLAATPRLTQ 127

Query: 187 VAKLKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQLEI 246
            A+ + E A I+  Q+     R ++++ +   ++  I      +  L+    SK+ +   
Sbjct: 128 -ARQRTEMAAIITLQEDLLHSRQQALKLETDGVRASIDGMETSLGALQKVMTSKQSEQST 186

Query: 247 FQDEIVGLRELLAKGYTPRTRILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQIIQT 306
              ++ GLR L A  Y PR ++L  ER   ++ GE+   +  + R  + + + +L+I Q 
Sbjct: 187 LSQQLQGLRPLAADNYVPRNKMLETERLFAQVSGELAQTSGEVGRTRRDIQQQKLRIAQR 246

Query: 307 RQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGGIIKP 366
           +Q++ ++V  +L +VQ KL+E+  +   A   L+   + A  AG + ++ + T GG+I P
Sbjct: 247 QQEYDKEVNSELSDVQAKLNEVISQREKADFNLANVQVRAPVAGTVVDMKIFTEGGVIAP 306

Query: 367 GETLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFNSRTIPIIDGVLSQVSADR 426
           G+ +MEIVPED  L+++ +I    ++ V  G+  E++F+AFN  T P + G ++ +SADR
Sbjct: 307 GQVMMEIVPEDQPLLVDGRIPVEMVNKVWSGLPVELQFTAFNQSTTPRVPGTVTLLSADR 366

Query: 427 FVNERDSSSYYKARIEVSDEELAKLGGLALRAGMPVDVMIKTGERTVLHYFLKPLEDALF 486
            V+E+D + YY  RI+VS+E    L GL ++ GMPV   ++TGER+ ++Y  KPL D + 
Sbjct: 367 LVDEKDGTPYYSLRIQVSEEGKRSLHGLEIKPGMPVQGFVRTGERSFINYLFKPLMDRMH 426

Query: 487 HGLIEE 492
             L EE
Sbjct: 427 LALTEE 432