Pairwise Alignments

Query, 333 a.a., peptidoglycan DD-metalloendopeptidase family protein from Rhodanobacter denitrificans MT42

Subject, 251 a.a., putative lipoprotein (VIMSS) from Escherichia coli BW25113

 Score =  125 bits (313), Expect = 1e-33
 Identities = 103/318 (32%), Positives = 131/318 (41%), Gaps = 92/318 (28%)

Query: 15  LAVTLLLAACGTMRSSVVVEPVAGGYDEHRPVASTPARTPIPGGSYAVAKGDTLYSIAFR 74
           L+V LLLA C   +SS       G Y                G  Y V +GDTLY I+  
Sbjct: 17  LSVGLLLAGCSGSKSSDT-----GTYS---------------GSVYTVKRGDTLYRISRT 56

Query: 75  KGVDFRDLAQWNGIAAPYTIWPGQRLTLSPPAGRAAAPPAAAPVHAGGASVRAAGASASS 134
            G   ++LA+ NGI+                      PP    V   G  ++  GA +SS
Sbjct: 57  TGTSVKELARLNGIS----------------------PPYTIEV---GQKLKLGGAKSSS 91

Query: 135 APATSAPVFEPVAAPASPSAAPSVEVPGTATANVPPRPVAPAVAATSVVPVAGVPTAAPA 194
                             S A S     T TA+V P                   +A P 
Sbjct: 92  I--------------TRKSTAKST----TKTASVTPS------------------SAVPK 115

Query: 195 SMPPPAPAAAGVSRVVSHVQWRWPADGSLVGRFQSGDA-IPGIEIAGKSGDPVRAAADGV 253
           S  PP          V    W WP  G ++  + + D    GI+I+   G P+ AA  G 
Sbjct: 116 SSWPP----------VGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGK 165

Query: 254 VVYSGNGLVGYGELVIIKHSDSFLSAYGHNSKRLVKEGQRVSMGQQIAEMGSTGTTRNEL 313
           VVY GN L GYG L++IKHS+ +++AY HN   LV  GQ V  GQ+IA MGST      L
Sbjct: 166 VVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRL 225

Query: 314 EFQIRKDGNPVDPLGYLP 331
            FQIR     +DPL YLP
Sbjct: 226 HFQIRYRATAIDPLRYLP 243