Pairwise Alignments

Query, 303 a.a., carbohydrate ABC transporter permease from Rhizobium sp. OAE497

Subject, 275 a.a., permease protein of sugar ABC transporter from Synechococcus elongatus PCC 7942

 Score =  127 bits (320), Expect = 2e-34
 Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 31/292 (10%)

Query: 19  AYATLSLISIFCAVPFFWVLLASFDGNAQLF----LRWPEQWTLANYARVFVKEDG-AKW 73
           A A L+L S+F   P  W LL S   NA +     + WP QWT+ +Y  ++ +     ++
Sbjct: 8   AIAALAL-SLFSLAPILWQLLTSIKVNADIAAIPTIYWPRQWTVEHYQALWQQTPAFGRY 66

Query: 74  LFNSLFVVGGATFIVMVLAGLGGYALSRTRAWWKLPFLYAILLIRVLPPTALVVPLYKFL 133
           L NS  V   AT   +++     YA++R R       + ++LL+ + P     V L++ L
Sbjct: 67  LLNSAVVSAIATLAALLIGTPCAYAIARRRDRSSQVLVGSLLLVTLFP----YVLLFQGL 122

Query: 134 LTLNNAEGAVLRPMFGSYARDIMRWTGFIDGYLGIMLVLATMQLPLALWIMKTFFDGLPR 193
           L                   +++RW  + + Y  +++    + LPL + ++++FF+ LP 
Sbjct: 123 L-------------------EVVRWLQWGNNYAALVVPYTALNLPLVILLLRSFFEQLPP 163

Query: 194 DYEEAAVMDGATMIQRIRRVLIPLALPGLAAAGLFTFMSAWGDFLLPLIFLSSPELQTLP 253
           + EEAA +DG ++ QR+  +L+PL  P L  AG+  F+ +W +++L L F+S   L+T+P
Sbjct: 164 ELEEAAQIDGLSLGQRLWLILVPLTAPALVTAGILAFIFSWNEYVLALSFISQQALKTVP 223

Query: 254 LGLFR-AFLRINEIDYGLLAALAFIYLLPAV-IAFGFARRFLVQTFSGGVKG 303
           + +     + I ++ YG +AA   +  LP + +     RR L    +G VKG
Sbjct: 224 IAVAEIGGISIFDVPYGDIAAATVVATLPLIGLVLVAQRRILEGLTAGAVKG 275