Pairwise Alignments

Query, 375 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum UW163

Subject, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 100/359 (27%), Positives = 166/359 (46%), Gaps = 25/359 (6%)

Query: 36  VPPAALAVSLTEPKRLDWPDTIEANGTTTAWQEAVIGAE-TGSLRITELLADVGSTVKRG 94
           VPP    V++  P      + +E +GT  A +   I A  TG+LR  +     GSTV +G
Sbjct: 34  VPPPPPKVTVGAPHVGPVTEYMEFSGTIAAVESVDITARVTGTLRSAQFRD--GSTVHKG 91

Query: 95  QVLARLADATATADLRKQEAAVAQARANLEQAQADLKRSKLAADSGALSAQKLDEYRITE 154
             L  +      A L++ EA +   +A L +A+ +L RS+      A S   + +++   
Sbjct: 92  DPLFIIEPEPYQAALQRAEAELEVQQAALARAETELARSRKLLTEKAGSETDVVKWQQQR 151

Query: 155 AVDRAALASAEAELQSKRITVSQTRIVAVDDGVISSRSALLGNVVSAG--TELFRLIRQG 212
              +A ++ A+A++++ RI +  TRI A  DG IS R A  GNVV  G  T L  ++R+ 
Sbjct: 152 DSAKANISRAKAQIETARIDLGYTRITAPFDGQISRRFADPGNVVGPGAVTRLATIVRRD 211

Query: 213 RVEWQAEVDAQQLTRIQPGQPAHVT--LPT-----------GKTADGKVRLVSPTLSTST 259
           +V     ++ + L R+   +P   T   PT           G    GK+    P +  +T
Sbjct: 212 QVHVYFNINERDLLRLMAERPKPKTASAPTMPLELALADEDGFPHAGKLDYADPGVDPAT 271

Query: 260 GRAIVYVALDGRDAQ--PGMFAGGRIELA-SRPALTVPESALVPRDGRTDVYVLNSDGVS 316
           G   +         +  PG+FA  R+ +  S  A+ VP+ A+      + V ++N+  ++
Sbjct: 272 GTMQLRGLFPNPSGRLLPGLFARIRVAVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQNIA 331

Query: 317 VARRTVATGRRRDGRVEVTTGLNADARVVASGGGFLSDGARVRVAPSTVASGTGEGAAR 375
             +R V  G   +G   V+ GL+A+ RVV +G      G+ V   P   A  TG+ A +
Sbjct: 332 -EQRAVVLGPLHEGYRVVSKGLSAEDRVVVNGIQRARPGSPVDPTP---APDTGQPAGK 386