Pairwise Alignments

Query, 385 a.a., ABC transporter permease from Ralstonia solanacearum UW163

Subject, 368 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 94/321 (29%), Positives = 148/321 (46%), Gaps = 23/321 (7%)

Query: 11  GTLAAIIMGAMGFAAHAQTGVTADSIVVGQSAPLSGAAAPLGQQLSLGARLYFNAVNAAG 70
           G LAA    AMG  + AQ  +T     VG + P++G  A  G+QL+ GA      +NA G
Sbjct: 7   GLLAATAAFAMGVGS-AQADIT-----VGVAGPMTGQYASFGEQLAKGAEQAVKDINAKG 60

Query: 71  GIHGRKIDFRVLDDAFDPDLTTRNTRTLINNAKAFALFGYVGTQSSLAAMKLANPEGIPF 130
           G+ G K+  +  DDA DP          +N+   F + G+  + SS+ A  + N EGI  
Sbjct: 61  GVLGEKLVLKKGDDACDPKQAVAVANQFVNDKVVF-VAGHFCSGSSIPASAVYNEEGIVQ 119

Query: 131 FAPYAGAQSLREPFVRNVFHVRAGFNDE---TAAIVQQIRVVGLKRIAVIHNDDAFGRAG 187
            +P +    L E    NVF    G +D+   TA    +    G ++IA+IH+  A+G+  
Sbjct: 120 ISPASTNPKLTEQGFENVFRT-CGRDDQQGPTAGDFLKAHFPG-QKIAIIHDKTAYGKGL 177

Query: 188 LEGVHRAL-AFPANQGLVLAAQAGVGRYTTEVRPALATVLAQKPDVIVVVCGYQTVAAL- 245
            +    AL      + L  A  AG   Y+     AL T L  +   I+ + GY T A L 
Sbjct: 178 ADETKSALNKAGVQEALYEAITAGEKDYS-----ALVTKLKNEGIKIIYLGGYHTEAGLI 232

Query: 246 VHEAKAQGYAGQLYNLSLVGSNVQTKELGAAGNGVVISQVMPYPRK--AATPIVREYQKL 303
           + +AK QG   ++ +   + S+      G AG+G + +   P PRK   A  +V+ +   
Sbjct: 233 IRQAKEQGLDARIVSGDALVSSEFASIAGPAGDGTLFT-FSPDPRKNPEAAAVVKSFTDA 291

Query: 304 -LKSNGITEFDYASLEGYVAA 323
              + G T + Y +++ +  A
Sbjct: 292 GYNAEGYTLYTYGAVQAWAQA 312