Pairwise Alignments

Query, 317 a.a., shikimate dehydrogenase from Ralstonia solanacearum UW163

Subject, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  106 bits (264), Expect = 8e-28
 Identities = 99/317 (31%), Positives = 139/317 (43%), Gaps = 30/317 (9%)

Query: 7   PSLLAGLIGAGIQRSLSPAMHQQEGDAQGLRYVYQIIDLEALGLTPDALPELLTAAERFG 66
           P  L G+IG  +  ++SP +H        +  VY    LE     P  + + +TA     
Sbjct: 8   PRELYGIIGHPLGHTMSPLLHNWGFSLLDVPAVYMAWPLE-----PGRVGDFITAVRTLP 62

Query: 67  FAGLNITHPCKQRVLQYLDDLSDDARALGAVNTVVFKDGRRIGHNTDWWGFAESFR-RGL 125
             G ++T P KQ VL  LD +SD ARA+GAVNT+ ++DG+ +G NTD  GF    R R  
Sbjct: 63  IRGASVTIPHKQAVLPLLDGVSDRARAVGAVNTLYWRDGQLLGENTDVTGFLAPLRQRAA 122

Query: 126 PDAPMGQVVQLGAGGAGAAVAHAVLTLGAQSLTLFDVEPERARQLAASLCGRFGPGRAQA 185
                 + + LG GGA  AV   +  LG     +      RA  +      +  P  A+ 
Sbjct: 123 AGWRCERALVLGNGGAARAVLAGLRELGPAGDGVV-----RAVGVTGRNAEKAAPLAAEF 177

Query: 186 GADL----AAAMAAADGLVHATPTGMAG-HPGLPLPPDLLQSRHWVA-----------EI 229
           GA++    A     AD +V+ TP GM+G   G    P+   +   VA           ++
Sbjct: 178 GAEVVDWDARVHWGADLVVNTTPMGMSGERQGDTAFPEQGFAAQGVAAGGDGRRGLAYDL 237

Query: 230 VYFPLETELLRHARALGCRTLDGGGMAVFQAVGAFELFTGI---APNAHRMLAHFAALQD 286
           VY PL T  L  A   G  T DG GM V Q    F L+TG+   A  A  ++A    L D
Sbjct: 238 VYNPLRTRFLSEAADAGWDTQDGLGMFVEQGREQFRLWTGLELPAEGARTLVAVALGLGD 297

Query: 287 AAATAGAGAAGTRGIAR 303
            A     G     G+ +
Sbjct: 298 VAVGRVCGQCELPGLGK 314