Pairwise Alignments

Query, 441 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum UW163

Subject, 417 a.a., RND transporter MFP subunit from Pseudomonas fluorescens FW300-N2C3

 Score =  333 bits (854), Expect = 6e-96
 Identities = 192/420 (45%), Positives = 263/420 (62%), Gaps = 17/420 (4%)

Query: 2   SLSKRTLALSVAAVIGAAAVGTYGVVSNAGASQQPAAAPAAMPVDVAPAIARNVTEWDEF 61
           SLSK    L++ AV+         V+S  G +   AA+     V VA  + + V EWDEF
Sbjct: 4   SLSKLRFPLALLAVL---------VMSACGKTPDTAASMPPAKVSVAKVLEQPVNEWDEF 54

Query: 62  SGRLEAVERVEVRPLVGGTIVAVHFKDGSIVKKGDPLFTIDPRPYAAEVARTQAALTAAK 121
           +GRLEA E VE+RP V G I  V F +G++VKKGD LF IDPRP+ AEV R +A L  A+
Sbjct: 55  TGRLEAPETVEIRPRVSGQIDEVAFTEGALVKKGDLLFQIDPRPFQAEVRRLEAQLAQAR 114

Query: 122 SRVAYTASELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAARLNLEYTRI 181
           +    + +E  R ++L   NAI+    + + +AA+EA+A      A LD A+LNL +TR+
Sbjct: 115 ATATRSENEAQRGERLRLSNAISAELADSRTSAAQEARAAAAAIQAQLDLAKLNLSFTRV 174

Query: 182 VAPVAGRVSRAEITVGNVVATGGAAPVLTTLVSVSPMYAAFDADEQTYLRFSANAAHGGR 241
            +P++GRVSRA+IT GN+V T    P LT++VS   +YA FDADE+ +L+++  A  G R
Sbjct: 175 TSPISGRVSRADITAGNLV-TADVTP-LTSVVSTDKVYAYFDADERVFLKYTQLARQGQR 232

Query: 242 ---TPVYIGLANEDGYTREGVIQSVDNRLDVRSGTIRVRATVDNADGRLTPGLYARVKMS 298
              TPVY+GL+NEDG    G +  VDN+++ ++GTIR RA  DN DG  TPGLYAR+K+ 
Sbjct: 233 GQATPVYMGLSNEDGNPHLGQMNFVDNQVNPQTGTIRGRAVFDNKDGAYTPGLYARLKLV 292

Query: 299 SGTPHDAVLISDKAVGTDQDKKFVLVVDAANKTSYRAVTLGASVDGLRVVKAGLKVGERI 358
               + AVLI+D+AVGTD  KKFVLV+DA NK +YRAV LG  ++GLR+V++GL   + I
Sbjct: 293 GSGTYAAVLINDEAVGTDLGKKFVLVMDADNKPAYRAVELGPKIEGLRIVRSGLSKDDTI 352

Query: 359 VVNGLQRVRPGDPVTPNAVTMDSLVAKRTVHPGSPPQPDADARNTAEAAAPAPATAPAAK 418
           +V GLQR RPG PVTP  V M S     T+   +  +   +A N  + A    A+  A K
Sbjct: 353 IVKGLQRARPGAPVTPETVPMAS---DETIAALAQQRKALEASNLPQVAPSKAASGSAGK 409